Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37812 SustainPine v3.0 1589
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene39503 SustainPine v3.0 242
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 7.0e-24
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 1.527e-14
Internal
sp_v3.0_unigene40235 SustainPine v3.0 671
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene40535 SustainPine v3.0 867
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene40536 SustainPine v3.0 1066
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene40563 SustainPine v3.0 2220
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene40564 SustainPine v3.0 1062
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
N-terminus
sp_v3.0_unigene40653 SustainPine v3.0 414
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 7.47e-29
Putative N-terminus
sp_v3.0_unigene42177 SustainPine v3.0 219
AutoFact: Pollen-specific leucine-rich repeat extensin-like protein 3 n=2 Tax=Arabidopsis RepID=PLRX3_ARATH 6.0e-19
FL-Next: sp=Pollen-specific leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 1.573e-24
Internal
sp_v3.0_unigene42186 SustainPine v3.0 615
AutoFact: GH10727 n=1 Tax=Drosophila grimshawi RepID=B4JBS8_DROGR 5.0e-06
Sma3: Extensin 5.615e-06
coding
sp_v3.0_unigene42333 SustainPine v3.0 913
AutoFact: Expansin 1 n=1 Tax=Linum usitatissimum RepID=A9UJY1_LINUS 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene43712 SustainPine v3.0 337
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene44257 SustainPine v3.0 576
AutoFact: Drf_FH1 multi-domain protein 2.0e-21
Sma3: Glycine-rich protein 2.503e-15
coding
sp_v3.0_unigene46006 SustainPine v3.0 1137
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 1.093e-34
C-terminus
sp_v3.0_unigene48084 SustainPine v3.0 1546
AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene49083 SustainPine v3.0 1822
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene49119 SustainPine v3.0 1357
AutoFact: Atrophin-1 multi-domain protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Extensin 5.604e-35
Complete
sp_v3.0_unigene49341 SustainPine v3.0 381
AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene49443 SustainPine v3.0 685
AutoFact: Expansin 2 (Fragment) n=6 Tax=rosids RepID=B7U8J1_ZIZJJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene49501 SustainPine v3.0 197
AutoFact: Extensin-like protein n=2 Tax=Arabidopsis RepID=O49448_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 2.105e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain