Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene33168 SustainPine v3.0 581
AutoFact: Alpha-expansin 8, putative n=1 Tax=Ricinus communis RepID=B9T3P8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene33203 SustainPine v3.0 968
AutoFact: DUF1421 multi-domain protein 1.0e-14
Sma3: Extensin 1.028e-08
coding
sp_v3.0_unigene33381 SustainPine v3.0 1533
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.252e-19
Putative Complete
sp_v3.0_unigene33537 SustainPine v3.0 887
AutoFact: DUF1421 multi-domain protein 2.0e-13
FL-Next: sp=Pollen-specific leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 8.547e-13
Putative C-terminus
sp_v3.0_unigene33724 SustainPine v3.0 900
AutoFact: DUF1421 multi-domain protein 2.0e-14
Sma3: Extensin 1.157e-21
coding
sp_v3.0_unigene33732 SustainPine v3.0 559
AutoFact: Extensin_2 multi-domain protein 5.0e-16
Sma3: Extensin (Class I) 7.012e-09
coding
sp_v3.0_unigene34410 SustainPine v3.0 521
AutoFact: Extensin_2 multi-domain protein 2.0e-16
Sma3: Extensin 2.557e-18
coding
sp_v3.0_unigene34532 SustainPine v3.0 631
AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene34623 SustainPine v3.0 605
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 5.71e-39
Internal
sp_v3.0_unigene34874 SustainPine v3.0 1054
AutoFact: Drf_FH1 multi-domain protein 3.0e-17
Sma3: Extensin 3.495e-22
coding
sp_v3.0_unigene34875 SustainPine v3.0 1309
AutoFact: Pollen major allergen No.121 isoform 2 n=1 Tax=Cryptomeria japonica RepID=Q588B9_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 7.416e-39
Complete
sp_v3.0_unigene34919 SustainPine v3.0 814
AutoFact: Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S7R9_NEMVE 2.0e-07
Sma3: Extensin 2.202e-30
coding
sp_v3.0_unigene35418 SustainPine v3.0 940
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene35549 SustainPine v3.0 413
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene35733 SustainPine v3.0 767
AutoFact: DUF1421 multi-domain protein 5.0e-19
Sma3: Extensin 2.05907e-41
coding
sp_v3.0_unigene35947 SustainPine v3.0 287
AutoFact: Extensin_2 multi-domain protein 9.0e-10
coding
sp_v3.0_unigene35969 SustainPine v3.0 175
AutoFact: Extensin_2 multi-domain protein 6.0e-21
Sma3: Extensin 0.0
unknown
sp_v3.0_unigene36148 SustainPine v3.0 857
AutoFact: Drf_FH1 multi-domain protein 9.0e-19
Sma3: Extensin 2.733e-39
coding
sp_v3.0_unigene36963 SustainPine v3.0 1235
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Shorea parvifolia subsp. parvifolia RepID=C7F8A5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.225e-39
Complete
sp_v3.0_unigene37448 SustainPine v3.0 725
AutoFact: FAP multi-domain protein 1.0e-22
Sma3: Glycine-rich protein 4.015e-13
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain