Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene29579 SustainPine v3.0 1319
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.824e-36
Complete
sp_v3.0_unigene29668 SustainPine v3.0 961
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Sma3: Extensin 3.312e-31
coding
sp_v3.0_unigene30250 SustainPine v3.0 699
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.136e-38
C-terminus
sp_v3.0_unigene30301 SustainPine v3.0 431
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene30315 SustainPine v3.0 891
AutoFact: Drf_FH1 multi-domain protein 4.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene30440 SustainPine v3.0 888
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.688e-39
C-terminus
sp_v3.0_unigene31029 SustainPine v3.0 1017
AutoFact: DUF1421 multi-domain protein 2.0e-20
Sma3: Extensin 1.9e-10
coding
sp_v3.0_unigene31332 SustainPine v3.0 827
AutoFact: Expansin-3 n=1 Tax=Petunia x hybrida RepID=Q6RX67_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene31910 SustainPine v3.0 442
AutoFact: Extensin_2 multi-domain protein 3.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene31959 SustainPine v3.0 1066
AutoFact: DUF1421 multi-domain protein 1.0e-18
Sma3: Extensin 1.728e-34
coding
sp_v3.0_unigene32135 SustainPine v3.0 628
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 9.461e-36
Internal
sp_v3.0_unigene32204 SustainPine v3.0 307
AutoFact: Extensin_2 multi-domain protein 2.0e-25
Sma3: Extensin 0.0
coding
sp_v3.0_unigene32292 SustainPine v3.0 784
AutoFact: Extensin_2 multi-domain protein 7.0e-12
coding
sp_v3.0_unigene32532 SustainPine v3.0 551
AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene32745 SustainPine v3.0 593
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene32814 SustainPine v3.0 962
AutoFact: Isoform 2 of Extensin-1 n=1 Tax=Arabidopsis thaliana RepID=Q38913-2 1.0e-11
FL-Next: Isoform 2 of Extensin-1 OS=Arabidopsis thaliana GN=EXT1 0.0
Sma3: Extensin 4.714e-07
Putative Complete
sp_v3.0_unigene32915 SustainPine v3.0 634
AutoFact: DUF1421 multi-domain protein 1.0e-09
putative_coding
sp_v3.0_unigene33095 SustainPine v3.0 422
AutoFact: Extensin_2 multi-domain protein 6.0e-11
coding
sp_v3.0_unigene33101 SustainPine v3.0 1067
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Sma3: Extensin 6.394e-32
coding
sp_v3.0_unigene33136 SustainPine v3.0 1100
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.467e-33
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain