Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene203596 SustainPine v3.0 706
AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene205199 SustainPine v3.0 156
AutoFact: Extensin_2 multi-domain protein 9.0e-18
Sma3: Extensin 8.737e-22
unknown
sp_v3.0_unigene205626 SustainPine v3.0 233
AutoFact: Extensin_2 multi-domain protein 8.0e-25
Sma3: Extensin 0.0
coding
sp_v3.0_unigene205735 SustainPine v3.0 934
AutoFact: Drf_FH1 multi-domain protein 1.0e-20
Sma3: Extensin 4.05e-33
coding
sp_v3.0_unigene206226 SustainPine v3.0 357
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene206723 SustainPine v3.0 681
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Shorea parvifolia subsp. parvifolia RepID=C7F8A5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.4013e-45
C-terminus
sp_v3.0_unigene207178 SustainPine v3.0 889
AutoFact: DUF1421 multi-domain protein 5.0e-18
Sma3: Extensin 3.623e-22
coding
sp_v3.0_unigene207735 SustainPine v3.0 674
AutoFact: Atrophin-1 multi-domain protein 1.0e-16
FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
Sma3: Proline-rich protein 5.687e-10
Internal
sp_v3.0_unigene207962 SustainPine v3.0 314
AutoFact: Extensin_2 multi-domain protein 1.0e-14
Sma3: Extensin 4.769e-11
coding
sp_v3.0_unigene208668 SustainPine v3.0 669
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene209102 SustainPine v3.0 266
AutoFact: Expansin-A11 n=3 Tax=Arabidopsis RepID=EXP11_ARATH 2.0e-11
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene209582 SustainPine v3.0 786
AutoFact: Extensin_2 multi-domain protein 1.0e-08
Sma3: Hydroxyproline-rich protein 2.437e-06
coding
sp_v3.0_unigene209740 SustainPine v3.0 332
AutoFact: Extensin_2 multi-domain protein 1.0e-07
FL-Next: sp=Extensin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Hydroxyproline-rich protein 2.437e-06
Internal
sp_v3.0_unigene209937 SustainPine v3.0 190
AutoFact: LRX2, putative n=1 Tax=Ricinus communis RepID=B9RL73_RICCO 2.0e-17
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 6.653e-09
Internal
sp_v3.0_unigene210233 SustainPine v3.0 517
AutoFact: pectate lyase [Gossypium hirsutum] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 9.29495e-41
C-terminus
sp_v3.0_unigene210287 SustainPine v3.0 449
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene210317 SustainPine v3.0 1320
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 2, putative n=1 Tax=Ricinus communis RepID=B9SCJ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase protein 2, putative 8.676e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain