Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146517 SustainPine v3.0 636
AutoFact: pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.551e-32
C-terminus
sp_v3.0_unigene146549 SustainPine v3.0 448
AutoFact: Putative xyloglucan endotransglycosylase type 1 (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX84_PINPS 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.4013e-45
Internal
sp_v3.0_unigene146616 SustainPine v3.0 414
AutoFact: Drf_FH1 multi-domain protein 2.0e-13
Sma3: Extensin 1.687e-16
coding
sp_v3.0_unigene146647 SustainPine v3.0 761
AutoFact: Drf_FH1 multi-domain protein 2.0e-26
Sma3: Extensin 0.0
coding
sp_v3.0_unigene146720 SustainPine v3.0 675
AutoFact: PREDICTED: similar to Blastula protease-10 [Strongylocentrotus purpuratus] ref|XP_001193078.1| PREDICTED: similar to Blastula protease-10 [Strongylocentrotus purpuratus] 8.0e-05
Sma3: Extensin 3.284e-16
coding
sp_v3.0_unigene146741 SustainPine v3.0 734
AutoFact: PREDICTED: similar to Blastula protease-10 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E46530 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Extensin 3.857e-28
Putative C-terminus
sp_v3.0_unigene146793 SustainPine v3.0 343
AutoFact: Extensin_2 multi-domain protein 3.0e-13
Sma3: Extensin 2.956e-26
coding
sp_v3.0_unigene146853 SustainPine v3.0 792
AutoFact: Drf_FH1 multi-domain protein 1.0e-11
Sma3: Extensin 1.806e-11
coding
sp_v3.0_unigene146887 SustainPine v3.0 622
AutoFact: Drf_FH1 multi-domain protein 3.0e-14
Sma3: Extensin 8.33e-20
putative_coding
sp_v3.0_unigene146900 SustainPine v3.0 604
AutoFact: Flocculin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FIF9_TRIVA 1.0e-07
FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
Sma3: Extensin 5.345e-39
Internal
sp_v3.0_unigene146915 SustainPine v3.0 704
AutoFact: Drf_FH1 multi-domain protein 2.0e-22
Sma3: Extensin 8.412e-37
unknown
sp_v3.0_unigene146938 SustainPine v3.0 342
AutoFact: Extensin_2 multi-domain protein 3.0e-11
Sma3: Proline-rich protein 1.784e-15
unknown
sp_v3.0_unigene146953 SustainPine v3.0 648
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Sma3: Extensin 2.29813e-43
coding
sp_v3.0_unigene149272 SustainPine v3.0 209
AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene149387 SustainPine v3.0 167
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene149687 SustainPine v3.0 269
AutoFact: pectate lyase [Prunus persica] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 7.942e-39
Internal
sp_v3.0_unigene159593 SustainPine v3.0 390
AutoFact: Cell wall protein Exp4 n=1 Tax=Mirabilis jalapa RepID=Q84L38_MIRJA 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene160155 SustainPine v3.0 215
AutoFact: Isoform 2 of Extensin-1 n=1 Tax=Arabidopsis thaliana RepID=Q38913-2 2.0e-06
FL-Next: Isoform 2 of Extensin-1 OS=Arabidopsis thaliana GN=EXT1 0.0
Sma3: Hydroxyproline-rich protein 2.437e-06
Putative N-terminus
sp_v3.0_unigene161816 SustainPine v3.0 269
AutoFact: alpha-expansin 2 [Populus tremula x Populus tremuloides] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene163269 SustainPine v3.0 375
AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 1.038e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain