Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene142365 SustainPine v3.0 469
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene142415 SustainPine v3.0 540
AutoFact: Extensin_2 multi-domain protein 2.0e-12
Sma3: Hydroxyproline-rich protein 8.772e-06
coding
sp_v3.0_unigene143031 SustainPine v3.0 494
AutoFact: Xyloglucan:xyloglucosyl transferase (Fragment) n=4 Tax=Pseudotsuga RepID=C6FD23_PSEMZ 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.999e-36
Putative C-terminus
sp_v3.0_unigene143120 SustainPine v3.0 249
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 2.0e-16
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 1.634e-12
Internal
sp_v3.0_unigene143149 SustainPine v3.0 387
AutoFact: Extensin_2 multi-domain protein 2.0e-16
Sma3: Extensin 5.91e-29
coding
sp_v3.0_unigene143217 SustainPine v3.0 576
AutoFact: xyloglucan endotransglycosylase [Ananas comosus] 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.406e-32
C-terminus
sp_v3.0_unigene143392 SustainPine v3.0 349
AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene143867 SustainPine v3.0 331
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.05238e-42
Internal
sp_v3.0_unigene143893 SustainPine v3.0 760
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene144549 SustainPine v3.0 775
AutoFact: putative VAMP-associated protein [Arabidopsis thaliana] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 6.165e-18
Putative C-terminus
sp_v3.0_unigene144601 SustainPine v3.0 979
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.495e-36
Putative Complete
sp_v3.0_unigene144749 SustainPine v3.0 423
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 4.962e-39
Internal
sp_v3.0_unigene145284 SustainPine v3.0 1207
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 3.042e-30
C-terminus
sp_v3.0_unigene145293 SustainPine v3.0 514
AutoFact: Extensin_2 multi-domain protein 5.0e-19
Sma3: Extensin 1.388e-39
coding
sp_v3.0_unigene145321 SustainPine v3.0 367
AutoFact: xyloglucan endotransglycosylase precursor [Populus tremula x Populus tremuloides] 6.0e-28
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.683e-38
N-terminus
sp_v3.0_unigene145371 SustainPine v3.0 472
AutoFact: Atrophin-1 multi-domain protein 1.0e-09
putative_coding
sp_v3.0_unigene145458 SustainPine v3.0 454
AutoFact: Extensin_2 domain containing protein 8.0e-14
Sma3: Extensin (Class I) 3.221e-21
coding
sp_v3.0_unigene145516 SustainPine v3.0 656
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Tropaeolum majus RepID=Q41614_TROMA 0.0
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 3.532e-39
Internal
sp_v3.0_unigene145607 SustainPine v3.0 372
AutoFact: Extensin_2 multi-domain protein 2.0e-18
Sma3: Extensin 3.493e-39
coding
sp_v3.0_unigene145624 SustainPine v3.0 475
AutoFact: Extensin_2 multi-domain protein 3.0e-16
Sma3: Extensin 1.291e-30
putative_coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain