Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127940 SustainPine v3.0 742
• AutoFact: Expansin n=2 Tax=Sapindaceae RepID=A4GWU5_LITCN 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene127957 SustainPine v3.0 911
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene128277 SustainPine v3.0 558
• AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene128288 SustainPine v3.0 456
• AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 8.00141e-43
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Extensin-like protein 5.095e-26
Internal
sp_v3.0_unigene128366 SustainPine v3.0 676
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene128488 SustainPine v3.0 724
• AutoFact: pectate lyase [Gossypium hirsutum] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene128573 SustainPine v3.0 550
• AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene128630 SustainPine v3.0 478
• AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 1.134e-21
N-terminus
sp_v3.0_unigene128871 SustainPine v3.0 452
• AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 4.03e-34
N-terminus
sp_v3.0_unigene129064 SustainPine v3.0 504
• AutoFact: Extensin_2 multi-domain protein 5.0e-12
• Sma3: Extensin 2.182e-26
coding
sp_v3.0_unigene129129 SustainPine v3.0 442
• AutoFact: Extensin_2 multi-domain protein 8.0e-27
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene129246 SustainPine v3.0 945
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene129366 SustainPine v3.0 424
• AutoFact: pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 4.277e-19
C-terminus
sp_v3.0_unigene129560 SustainPine v3.0 382
• AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene129708 SustainPine v3.0 350
• AutoFact: putative pectate-lyase [Capsicum annuum] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene129815 SustainPine v3.0 934
• AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene130470 SustainPine v3.0 289
• AutoFact: Expansin 2 n=1 Tax=Cunninghamia lanceolata RepID=A1Z1N8_CUNLA 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene130722 SustainPine v3.0 635
• AutoFact: pectate lyase precursor [Glycine max] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene131182 SustainPine v3.0 349
• AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene131385 SustainPine v3.0 554
• AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain