Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene84250 SustainPine v3.0 252
AutoFact: Extensin_2 multi-domain protein 4.0e-13
Sma3: Extensin 4.237e-06
coding
sp_v3.0_unigene84336 SustainPine v3.0 236
AutoFact: Extensin_2 multi-domain protein 8.0e-16
Sma3: Extensin (Class I) 2.545e-15
coding
sp_v3.0_unigene84472 SustainPine v3.0 270
AutoFact: Extensin_2 multi-domain protein 4.0e-20
Sma3: Extensin 2.219e-37
coding
sp_v3.0_unigene84845 SustainPine v3.0 233
AutoFact: Extensin_2 multi-domain protein 3.0e-15
Sma3: Extensin 1.642e-20
coding
sp_v3.0_unigene85465 SustainPine v3.0 319
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Proline-rich protein 1.528e-10
coding
sp_v3.0_unigene86147 SustainPine v3.0 265
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Extensin 1.555e-24
coding
sp_v3.0_unigene86457 SustainPine v3.0 238
AutoFact: Extensin_2 multi-domain protein 2.0e-18
Sma3: Extensin 1.363e-26
coding
sp_v3.0_unigene86832 SustainPine v3.0 410
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U598_VITVI 6.0e-07
Sma3: Extensin 3.391e-22
coding
sp_v3.0_unigene86928 SustainPine v3.0 340
AutoFact: Extensin_2 multi-domain protein 4.0e-12
Sma3: Extensin 1.85e-18
coding
sp_v3.0_unigene93946 SustainPine v3.0 782
AutoFact: Alpha-expansin 7, putative n=1 Tax=Ricinus communis RepID=B9RBZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene95255 SustainPine v3.0 635
AutoFact: Pectate lyase (Fragment) n=1 Tax=Glycine max RepID=A4GU25_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene95574 SustainPine v3.0 573
AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 4.04e-31
Internal
sp_v3.0_unigene95763 SustainPine v3.0 438
AutoFact: Extensin_2 multi-domain protein 9.0e-14
Sma3: Extensin 6.665e-32
unknown
sp_v3.0_unigene97516 SustainPine v3.0 1361
AutoFact: pectate lyase [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene97561 SustainPine v3.0 388
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene97797 SustainPine v3.0 1713
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative Complete
sp_v3.0_unigene97805 SustainPine v3.0 462
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.4013e-45
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene98216 SustainPine v3.0 321
AutoFact: Extensin_2 multi-domain protein 6.0e-17
Sma3: Extensin 1.955e-18
coding
sp_v3.0_unigene99047 SustainPine v3.0 383
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 3.0e-24
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene99799 SustainPine v3.0 714
AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain