Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene74002 SustainPine v3.0 408
AutoFact: pectate lyase [Prunus persica] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene74029 SustainPine v3.0 450
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene75290 SustainPine v3.0 229
AutoFact: pectate lyase [Gossypium hirsutum] 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene75922 SustainPine v3.0 501
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
N-terminus
sp_v3.0_unigene76578 SustainPine v3.0 350
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 2, putative n=1 Tax=Ricinus communis RepID=B9SCJ0_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.109e-19
Internal
sp_v3.0_unigene76995 SustainPine v3.0 252
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene77776 SustainPine v3.0 237
AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene78929 SustainPine v3.0 387
AutoFact: pectate lyase [Salix gilgiana] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene78992 SustainPine v3.0 395
AutoFact: Xyloglucan endotransglycosylase 2 n=1 Tax=Litchi chinensis RepID=A0MMD5_LITCN 2.00386e-43
FL-Next: tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine). 0.0
Sma3: Xyloglucan endotransglycosylase 2.122e-37
Internal
sp_v3.0_unigene79274 SustainPine v3.0 341
AutoFact: pectate lyase B [Fragaria x ananassa] gb|AAZ31565.1| pectate lyase isoform 3 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79326 SustainPine v3.0 342
AutoFact: Pectate lyase 8 n=4 Tax=Zea mays RepID=B6SSS1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79745 SustainPine v3.0 396
AutoFact: pectate lyase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79763 SustainPine v3.0 264
AutoFact: Legumin B n=1 Tax=Gossypium hirsutum RepID=LEGB_GOSHI 7.0e-23
FL-Next: tr=Legumin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: 11S globulin 4.036e-26
Internal
sp_v3.0_unigene80541 SustainPine v3.0 288
AutoFact: Expansin 2 (Fragment) n=6 Tax=rosids RepID=B7U8J1_ZIZJJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene81676 SustainPine v3.0 199
AutoFact: Extensin_2 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Extensin 3.513e-23
Internal
sp_v3.0_unigene82304 SustainPine v3.0 318
AutoFact: GI11423 n=1 Tax=Drosophila mojavensis RepID=B4KGD7_DROMO 3.0e-05
coding
sp_v3.0_unigene82975 SustainPine v3.0 268
AutoFact: Extensin_2 multi-domain protein 9.0e-11
Sma3: Proline-rich protein 3.494e-13
coding
sp_v3.0_unigene83367 SustainPine v3.0 294
AutoFact: Drf_FH1 multi-domain protein 2.0e-14
Sma3: Extensin 1.357e-22
coding
sp_v3.0_unigene83369 SustainPine v3.0 302
AutoFact: Drf_FH1 multi-domain protein 3.0e-13
Sma3: Proline-rich protein 3.074e-17
coding
sp_v3.0_unigene84202 SustainPine v3.0 291
AutoFact: Extensin_2 multi-domain protein 1.0e-16
Sma3: Extensin 6.967e-22
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain