Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64684 SustainPine v3.0 153
• AutoFact: Alpha-expansin n=1 Tax=Gossypium hirsutum RepID=Q8LKJ8_GOSHI 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative C-terminus
sp_v3.0_unigene65525 SustainPine v3.0 368
• AutoFact: Expansin 2 n=1 Tax=Cunninghamia lanceolata RepID=A1Z1N8_CUNLA 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene65677 SustainPine v3.0 145
• AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Sagittaria pygmaea RepID=Q4LET7_9LILI 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 8.411e-40
Internal
sp_v3.0_unigene65678 SustainPine v3.0 423
• AutoFact: Expansin-A2 n=3 Tax=Arabidopsis RepID=EXPA2_ARATH 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene66117 SustainPine v3.0 394
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene66442 SustainPine v3.0 390
• AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 3.19496e-42
N-terminus
sp_v3.0_unigene66465 SustainPine v3.0 364
• AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative xyloglucan endotransglycosylase 8.536e-18
N-terminus
sp_v3.0_unigene66644 SustainPine v3.0 374
• AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.361e-19
Internal
sp_v3.0_unigene68044 SustainPine v3.0 231
• AutoFact: Alpha-expansin 1 n=1 Tax=Coffea arabica RepID=D3J164_COFAR 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene68677 SustainPine v3.0 235
• AutoFact: Pectate lyase (Fragment) n=3 Tax=Musa acuminata RepID=Q8RVQ3_MUSAC 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 7.091e-39
Internal
sp_v3.0_unigene69720 SustainPine v3.0 188
• AutoFact: Leucine-rich repeat/extensin n=2 Tax=Nicotiana RepID=A3KD20_NICPL 7.0e-10
• FL-Next: sp=Leucine-rich repeat extensin-like protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin-like protein 3.675e-12
Internal
sp_v3.0_unigene70139 SustainPine v3.0 418
• AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative xyloglucan endotransglycosylase 5.038e-15
N-terminus
sp_v3.0_unigene71060 SustainPine v3.0 141
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.0e-09
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene71130 SustainPine v3.0 356
• AutoFact: alpha-expansin 5 [Gossypium hirsutum] gb|ABR57470.1| alpha-expansin 5 [Gossypium tomentosum] 3.0e-14
• FL-Next: tr=Expansin 1; Cunninghamia lanceolata (China fir). 0.0
• Sma3: Expansin 3 4.201e-10
C-terminus
sp_v3.0_unigene71757 SustainPine v3.0 284
• AutoFact: pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 1.497e-16
Putative C-terminus
sp_v3.0_unigene71758 SustainPine v3.0 289
• AutoFact: Expansin (Fragment) n=1 Tax=Solanum tuberosum RepID=D3YE72_SOLTU 2.0e-18
• FL-Next: tr=Expansin 1; Cunninghamia lanceolata (China fir). 0.0
• Sma3: Expansin 4.413e-14
Internal
sp_v3.0_unigene72608 SustainPine v3.0 326
• AutoFact: Alpha-expansin 15, putative n=1 Tax=Ricinus communis RepID=B9RLX1_RICCO 4.0e-24
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene72838 SustainPine v3.0 266
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 6.691e-22
Internal
sp_v3.0_unigene72908 SustainPine v3.0 239
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene73961 SustainPine v3.0 466
• AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain