Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation elongation factor activity

Term: GO:0003746  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65867 SustainPine v3.0 191
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 2.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.026e-36
Internal
sp_v3.0_unigene65901 SustainPine v3.0 143
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.55e-33
Internal
sp_v3.0_unigene65923 SustainPine v3.0 172
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.696e-14
Internal
sp_v3.0_unigene65924 SustainPine v3.0 126
• AutoFact: translation elongation factor 1 alpha [Plantago major] 3.0e-07
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 6.67e-06
Putative C-terminus
sp_v3.0_unigene66360 SustainPine v3.0 255
• AutoFact: Putative elongation factor 1 beta n=1 Tax=Hordeum vulgare RepID=Q9M3U8_HORVU 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.645e-14
Internal
sp_v3.0_unigene67235 SustainPine v3.0 247
• AutoFact: Elongation factor 2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9FEL2_TOBAC 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 1.219e-40
Internal
sp_v3.0_unigene70092 SustainPine v3.0 446
• AutoFact: Elongation factor EF-P n=2 Tax=Arabidopsis RepID=Q8VZW6_ARATH 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene70994 SustainPine v3.0 198
• AutoFact: Elongation factor-like protein n=3 Tax=Solanum RepID=Q3HVL1_SOLTU 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.198e-14
C-terminus
sp_v3.0_unigene73569 SustainPine v3.0 164
• AutoFact: Elongation factor 1-alpha n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S3L7_PARBP 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.836e-22
Putative C-terminus
sp_v3.0_unigene73665 SustainPine v3.0 319
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=1 Tax=Macrolepiota mastoidea RepID=F1B353_9AGAR 4.0e-39
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.716e-33
Internal
sp_v3.0_unigene73688 SustainPine v3.0 445
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 6.912e-34
Misassembled
sp_v3.0_unigene73729 SustainPine v3.0 471
• AutoFact: RecName: Full=Elongation factor 2; Short=EF-2 gb|AAO32487.1| EFT [Naumovia castellii] 0.0
• FL-Next: sp=Elongation factor 2; Parachlorella kessleri (Green alga) (Chlorella kessleri). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene73753 SustainPine v3.0 451
• AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene73900 SustainPine v3.0 420
• AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Agaricales RepID=Q2HXZ3_9AGAR 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.638e-25
Internal
sp_v3.0_unigene74031 SustainPine v3.0 226
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-16
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.8e-28
Misassembled
sp_v3.0_unigene74555 SustainPine v3.0 379
• AutoFact: translation elongation factor-1 alpha [Picea abies] 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.3936e-42
Internal
sp_v3.0_unigene74565 SustainPine v3.0 283
• AutoFact: 116 kda u5 small nuclear ribonucleoprotein component [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775690.1| hypothetical protein CNBD4190 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21043.1| hypothetical protein CNBD4190 [Cryptococcu 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor tu gtp-binding domain protein 2 1.197e-08
Internal
sp_v3.0_unigene74632 SustainPine v3.0 286
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene74709 SustainPine v3.0 302
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-40
• FL-Next: tr=Elongation factor 1-alpha; Capsicum annuum (Bell pepper). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene74762 SustainPine v3.0 313
• AutoFact: Eukaryotic polypeptide chain release factor 3 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXE3_COPC7 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 6.663e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain