Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: translation elongation factor activity

Term: GO:0003746  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene113733 SustainPine v3.0 256
• AutoFact: MCM2_N multi-domain protein 4.0e-05
unknown
sp_v3.0_unigene114600 SustainPine v3.0 143
• AutoFact: elongation factor-1 alpha [Musa acuminata] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 6.401e-10
Putative C-terminus
sp_v3.0_unigene119540 SustainPine v3.0 461
• AutoFact: Elongation factor 1 alpha n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH1_AJECH 6.0e-40
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene119827 SustainPine v3.0 224
• AutoFact: FACT complex subunit SPT16, putative n=1 Tax=Ricinus communis RepID=B9RFP6_RICCO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Facilitates chromatin transcription complex subunit SPT16 6.203e-13
Internal
sp_v3.0_unigene121393 SustainPine v3.0 166
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.636e-34
Internal
sp_v3.0_unigene124416 SustainPine v3.0 177
• AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-14
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.929e-16
Internal
sp_v3.0_unigene124827 SustainPine v3.0 257
• AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Diaphorina citri RepID=Q0PWT7_DIACI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene124969 SustainPine v3.0 560
• AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene126786 SustainPine v3.0 1763
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene126829 SustainPine v3.0 1438
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 0.0
Complete
sp_v3.0_unigene126869 SustainPine v3.0 1245
• AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.71e-28
Misassembled
sp_v3.0_unigene126973 SustainPine v3.0 950
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene127024 SustainPine v3.0 733
• AutoFact: RecName: Full=Elongation factor 1-gamma 2; Short=EF-1-gamma 2; AltName: Full=eEF-1B gamma 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.541e-12
C-terminus
sp_v3.0_unigene127496 SustainPine v3.0 532
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 2.0e-27
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.053e-27
Putative Complete
sp_v3.0_unigene127544 SustainPine v3.0 580
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene127557 SustainPine v3.0 1059
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene128485 SustainPine v3.0 419
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene128540 SustainPine v3.0 262
• AutoFact: Unassigned protein
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene128589 SustainPine v3.0 511
• AutoFact: Translation elongation factor-TU (Fragment) n=1 Tax=Glycine max RepID=O23962_SOYBN 4.0e-10
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-Tu 0.0
C-terminus
sp_v3.0_unigene129258 SustainPine v3.0 675
• AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 4.2039e-45
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.814e-09
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain