Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation elongation factor activity

Term: GO:0003746  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene81043 SustainPine v3.0 93
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene81351 SustainPine v3.0 194
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 7.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.39e-31
Internal
sp_v3.0_unigene81390 SustainPine v3.0 177
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 7.0e-15
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
• AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
• AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene94686 SustainPine v3.0 473
• AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Global transcription factor group 6.816e-07
Internal
sp_v3.0_unigene94696 SustainPine v3.0 482
• AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene94894 SustainPine v3.0 1766
• AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene95385 SustainPine v3.0 462
• AutoFact: Unassigned protein
• FL-Next: sp=BTB/POZ domain-containing protein At2g04740; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene98526 SustainPine v3.0 456
• AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99804 SustainPine v3.0 807
• AutoFact: Elongation factor P n=3 Tax=Andropogoneae RepID=B6TAH3_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene100231 SustainPine v3.0 902
• AutoFact: Med26 domain containing protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene101290 SustainPine v3.0 781
• AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
• FL-Next: tr=Translation elongation factor EF-1 alpha; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102674 SustainPine v3.0 377
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.42e-29
Internal
sp_v3.0_unigene105343 SustainPine v3.0 313
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene105720 SustainPine v3.0 484
• AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 4.0e-37
• FL-Next: tr=RNA ligase isoform; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: RNA ligase isoform 3 5.586e-10
Internal
sp_v3.0_unigene106460 SustainPine v3.0 711
• AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Sma3: Global transcription factor group 3.912e-10
Internal
sp_v3.0_unigene106651 SustainPine v3.0 353
• AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Global transcription factor group 3.001e-10
Internal
sp_v3.0_unigene106777 SustainPine v3.0 248
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] gb|AEE76702.1| elongation factor EF-2 [Arabidopsis thaliana] 1.0e-25
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene107919 SustainPine v3.0 225
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain