Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription elongation regulator activity

Term: GO:0003711  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129786 SustainPine v3.0 226
AutoFact: plastid transcriptionally active 13 [Arabidopsis thaliana] gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AAM91077.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AEE74738.1| plastid transcriptionally active 13 [Arabidopsis thaliana] 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131710 SustainPine v3.0 426
unknown
sp_v3.0_unigene143311 SustainPine v3.0 515
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene144395 SustainPine v3.0 477
AutoFact: Unassigned protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene149646 SustainPine v3.0 416
AutoFact: Suppressor of ty, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SEX9_RICCO 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 1.186e-07
Internal
sp_v3.0_unigene159382 SustainPine v3.0 170
AutoFact: putative elongation factor (ISS) [Ostreococcus tauri] emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene161301 SustainPine v3.0 347
AutoFact: Global transcription factor group n=2 Tax=Populus trichocarpa RepID=B9HDT6_POPTR 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene162502 SustainPine v3.0 340
AutoFact: Suppressor of ty, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SEX9_RICCO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 1.186e-07
Internal
sp_v3.0_unigene163289 SustainPine v3.0 162
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 3.314e-10
Internal
sp_v3.0_unigene164235 SustainPine v3.0 356
AutoFact: plastid transcriptionally active 13 [Arabidopsis thaliana] gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AAM91077.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AEE74738.1| plastid transcriptionally active 13 [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene183277 SustainPine v3.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene198236 SustainPine v3.0 544
AutoFact: transcription elongation factor TFIIS [Schizosaccharomyces pombe 972h-] sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName: Full=TFIIS gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe] emb|CAC 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene198918 SustainPine v3.0 412
AutoFact: Transcription antitermination protein nusG n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Q1_CARHZ 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene200811 SustainPine v3.0 259
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain