Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase II transcription factor activity

Term: GO:0003702  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene190535 SustainPine v3.0 388
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 8.0e-24
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Complete
sp_v3.0_unigene191991 SustainPine v3.0 516
AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor TFIID TBP-1 subunit 3.032e-12
C-terminus
sp_v3.0_unigene198236 SustainPine v3.0 544
AutoFact: transcription elongation factor TFIIS [Schizosaccharomyces pombe 972h-] sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName: Full=TFIIS gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe] emb|CAC 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene202681 SustainPine v3.0 522
AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 2.0e-40
FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene204501 SustainPine v3.0 461
AutoFact: Transcription initiation factor IIA subunit 2 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RUT3_PHYPA 4.0e-27
FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain