Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene148527 SustainPine v3.0 250
• AutoFact: RecName: Full=50S ribosomal protein L24, chloroplastic; AltName: Full=CL24; Flags: Precursor gb|AAA34086.1| ribosomal protein L24 [Nicotiana tabacum] gb|AAA34114.1| ribosomal protein L24 [Nicotiana tabacum] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CL24 2.528e-17
Internal
sp_v3.0_unigene149723 SustainPine v3.0 315
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3JUJ9_PUCGT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene150146 SustainPine v3.0 376
• AutoFact: 30S ribosomal protein S12 n=12 Tax=Alphaproteobacteria RepID=RS12_CAUSK 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S12, chloroplastic 0.0
Complete
sp_v3.0_unigene150160 SustainPine v3.0 492
• AutoFact: 40S ribosomal protein S11 (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDL5_BRAPC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.401e-28
C-terminus
sp_v3.0_unigene150231 SustainPine v3.0 390
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 6.676e-32
C-terminus
sp_v3.0_unigene150258 SustainPine v3.0 312
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S5, chloroplastic 1.586e-31
Putative C-terminus
sp_v3.0_unigene150285 SustainPine v3.0 421
• AutoFact: ribosomal protein S9 [Lysiphlebus testaceipes] gb|AAX62466.1| ribosomal protein S9 variant 1 [Lysiphlebus testaceipes] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.94273e-44
C-terminus
sp_v3.0_unigene150376 SustainPine v3.0 369
• AutoFact: PREDICTED: similar to ribosomal protein S18 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005875AC 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.787e-12
N-terminus
sp_v3.0_unigene150415 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Euteleostei RepID=C0H7L0_SALSA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
C-terminus
sp_v3.0_unigene150439 SustainPine v3.0 366
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150475 SustainPine v3.0 362
• AutoFact: Ribosomal protein s4a n=1 Tax=Ancylostoma caninum RepID=A4ZVZ6_ANCCA 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.916e-20
C-terminus
sp_v3.0_unigene150571 SustainPine v3.0 463
• AutoFact: 60S ribosomal protein L11 n=7 Tax=Apocrita RepID=F4W748_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
C-terminus
sp_v3.0_unigene150600 SustainPine v3.0 264
• AutoFact: Probable 60S ribosomal protein L37-A n=10 Tax=Schizophora RepID=RL371_DROME 1.0e-21
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene150601 SustainPine v3.0 470
• AutoFact: 40S ribosomal protein S11, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AK39_CRYMR 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.581e-28
Putative Complete
sp_v3.0_unigene150671 SustainPine v3.0 410
• AutoFact: ribosomal protein S18 [Cherax destructor] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150694 SustainPine v3.0 321
• AutoFact: 60S ribosomal protein L11a, putative n=2 Tax=Theileria RepID=Q4N8W2_THEPA 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene150720 SustainPine v3.0 242
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 9.47e-32
Putative C-terminus
sp_v3.0_unigene150721 SustainPine v3.0 334
• AutoFact: Ribosomal protein L23a n=1 Tax=Aedes albopictus RepID=Q49B50_AEDAL 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 4.959e-09
C-terminus
sp_v3.0_unigene150766 SustainPine v3.0 184
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 5.121e-38
C-terminus
sp_v3.0_unigene150791 SustainPine v3.0 324
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.82169e-44
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain