Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene160139 SustainPine v3.0 459
• AutoFact: Probable RPL25-ribosomal protein L23a.e n=2 Tax=Ustilaginaceae RepID=E6ZVX9_9BASI 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Complete
sp_v3.0_unigene160344 SustainPine v3.0 279
• AutoFact: ribosomal protein S18-like [Oryza sativa Japonica Group] dbj|BAD30794.1| ribosomal protein S18-like [Oryza sativa Japonica Group] 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.813e-12
Putative C-terminus
sp_v3.0_unigene161013 SustainPine v3.0 365
• AutoFact: 40S ribosomal protein rpS11e n=2 Tax=Tetrahymena thermophila RepID=E6PBS9_TETTH 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 2.731e-24
N-terminus
sp_v3.0_unigene161547 SustainPine v3.0 480
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.45e-12
Putative Complete
sp_v3.0_unigene161681 SustainPine v3.0 454
• AutoFact: 40S ribosomal protein S9-1 n=1 Tax=Arabidopsis thaliana RepID=B3H7J6_ARATH 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 5.025e-33
Putative C-terminus
sp_v3.0_unigene161976 SustainPine v3.0 455
• AutoFact: 50S ribosomal protein L18 n=2 Tax=Agrobacterium RepID=RL18_AGRT5 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L18, chloroplastic 1.439e-11
C-terminus
sp_v3.0_unigene163322 SustainPine v3.0 413
• AutoFact: RecName: Full=40S ribosomal protein S18 gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians] 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene163352 SustainPine v3.0 320
• AutoFact: 30S ribosomal protein S11 n=67 Tax=Rhizobiales RepID=RS11_AGRRK 2.00386e-43
• FL-Next: sp=30S ribosomal protein S11, chloroplastic; Pseudotsuga sinensis var. wilsoniana. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 8.922e-40
N-terminus
sp_v3.0_unigene164476 SustainPine v3.0 219
• AutoFact: ribosomal protein S4e [Lygus lineolaris] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.315e-20
N-terminus
sp_v3.0_unigene164743 SustainPine v3.0 134
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 6.676e-32
Internal
sp_v3.0_unigene164932 SustainPine v3.0 279
• AutoFact: Ribosomal protein L37 n=1 Tax=Magnaporthe oryzae 70-15 RepID=A4RCE0_MAGO7 1.0e-27
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
N-terminus
sp_v3.0_unigene165387 SustainPine v3.0 423
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Schizosaccharomyces RepID=RL12_SCHPO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.004e-15
C-terminus
sp_v3.0_unigene165394 SustainPine v3.0 380
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Postia placenta Mad-698-R RepID=B8P8P5_POSPM 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 9.47e-32
C-terminus
sp_v3.0_unigene165414 SustainPine v3.0 245
• AutoFact: 60S ribosomal protein L11 n=4 Tax=Agaricomycetes RepID=B8P5N8_POSPM 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
Putative N-terminus
sp_v3.0_unigene165468 SustainPine v3.0 469
• AutoFact: 60S ribosomal protein L11 n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NC43_AJECG 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
C-terminus
sp_v3.0_unigene166013 SustainPine v3.0 243
• AutoFact: 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gb|EDN97648.1| 40S ribosomal protein S18 [Scle 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene166236 SustainPine v3.0 275
• AutoFact: ribosomal protein L12e [Mycetophagus quadripustulatus] 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12-3 9.747e-06
C-terminus
sp_v3.0_unigene173892 SustainPine v3.0 240
• Sma3: 40S ribosomal protein S9 1.819e-07
coding
sp_v3.0_unigene183051 SustainPine v3.0 740
• AutoFact: 40S ribosomal protein S18 n=9 Tax=sordariomyceta RepID=A4RPY6_MAGO7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene183137 SustainPine v3.0 283
• AutoFact: 30S ribosomal protein S13 n=3 Tax=cellular organisms RepID=RS13_FLAJ1 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S13, chloroplastic 8.362e-12
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain