Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156085 SustainPine v3.0 536
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Pleosporineae RepID=B2WFR3_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Complete
sp_v3.0_unigene156143 SustainPine v3.0 323
• AutoFact: 40S ribosomal protein S9, putative n=2 Tax=Paramecium tetraurelia RepID=Q6BFU7_PARTE 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.309e-29
N-terminus
sp_v3.0_unigene156332 SustainPine v3.0 382
• AutoFact: ribosomal protein L11-like [Nicotiana tabacum] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene156487 SustainPine v3.0 204
• AutoFact: 40S ribosomal subunit protein S9, putative n=1 Tax=Babesia bovis RepID=A7ATG1_BABBO 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 7.575e-26
Putative N-terminus
sp_v3.0_unigene156499 SustainPine v3.0 353
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.384e-10
N-terminus
sp_v3.0_unigene156512 SustainPine v3.0 320
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene156517 SustainPine v3.0 405
• AutoFact: 40S ribosomal protein S2 n=3 Tax=Ixodoidea RepID=A6N9Z8_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
N-terminus
sp_v3.0_unigene156564 SustainPine v3.0 269
• AutoFact: 60S ribosomal protein L12-3 [Arabidopsis thaliana] sp|Q9FF52.1|RL123_ARATH RecName: Full=60S ribosomal protein L12-3 dbj|BAB09840.1| 60S ribosomal protein L12 [Arabidopsis thaliana] gb|AAK62669.1| AT5g60670/mup24_80 [Arabidopsis thaliana] gb|AAL77726.1| A 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 1.722e-11
C-terminus
sp_v3.0_unigene156623 SustainPine v3.0 350
• AutoFact: KLTH0C07810p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEB4_LACTC 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.286e-35
C-terminus
sp_v3.0_unigene156671 SustainPine v3.0 409
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Arenicola marina RepID=A8UFC5_AREMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Putative Complete
sp_v3.0_unigene156679 SustainPine v3.0 400
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Schizosaccharomyces RepID=RL11_SCHPO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene157526 SustainPine v3.0 205
• AutoFact: 50S ribosomal protein L3, chloroplastic n=1 Tax=Odontella sinensis RepID=RK3_ODOSI 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L3, chloroplastic 1.647e-15
Internal
sp_v3.0_unigene157670 SustainPine v3.0 301
• AutoFact: PREDICTED: ribosomal protein L12-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC093 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 4.916e-19
N-terminus
sp_v3.0_unigene157699 SustainPine v3.0 433
• AutoFact: Ribosomal protein rps18 (Fragment) n=1 Tax=Arenicola marina RepID=A8UEN5_AREMA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.992e-12
C-terminus
sp_v3.0_unigene157749 SustainPine v3.0 223
• AutoFact: 40S ribosomal protein S9 n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFU5_9CHLO 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 4.799e-26
N-terminus
sp_v3.0_unigene157830 SustainPine v3.0 332
• AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.195e-10
Putative N-terminus
sp_v3.0_unigene157834 SustainPine v3.0 309
• AutoFact: SSU ribosomal protein S13P n=1 Tax=Fluviicola taffensis DSM 16823 RepID=F2II60_FLUTR 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S13, chloroplastic 4.257e-16
Internal
sp_v3.0_unigene157869 SustainPine v3.0 476
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITB7_AEQIR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
C-terminus
sp_v3.0_unigene158054 SustainPine v3.0 378
• AutoFact: 50S ribosomal protein L6 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=RL6_FLAJ1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L6, chloroplastic 3.657e-08
Internal
sp_v3.0_unigene158090 SustainPine v3.0 429
• AutoFact: 40S ribosomal protein S11 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WDX6_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.145e-20
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain