Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154338 SustainPine v3.0 458
• AutoFact: Ribosomal protein L37 n=2 Tax=Sclerotiniaceae RepID=A7F605_SCLS1 7.0e-36
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene154371 SustainPine v3.0 439
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_15 n=1 Tax=Blastocystis hominis RepID=D8M187_BLAHO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.796e-20
C-terminus
sp_v3.0_unigene154545 SustainPine v3.0 118
• AutoFact: 40S ribosomal protein S4 n=12 Tax=rosids RepID=RS4_GOSHI 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.755e-17
N-terminus
sp_v3.0_unigene154586 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene154598 SustainPine v3.0 333
• AutoFact: ribosomal protein DL11 [Drosophila melanogaster] prf||2108277A ribosomal protein L11 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene154676 SustainPine v3.0 206
• AutoFact: Putative 60S ribosomal protein RPL12 n=1 Tax=Flustra foliacea RepID=A9UDS1_9BILA 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
Putative N-terminus
sp_v3.0_unigene154748 SustainPine v3.0 229
• AutoFact: 60S ribosomal protein L12, putative n=3 Tax=Chromadorea RepID=A8NPJ4_BRUMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
N-terminus
sp_v3.0_unigene154752 SustainPine v3.0 472
• AutoFact: PREDICTED: 40S ribosomal protein S4-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CA4 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.092e-20
Internal
sp_v3.0_unigene154810 SustainPine v3.0 384
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.14e-35
C-terminus
sp_v3.0_unigene154861 SustainPine v3.0 488
• AutoFact: Ribosomal protein L17 family protein [Arabidopsis thaliana] gb|AAM64301.1| ribsomal protein-like [Arabidopsis thaliana] gb|AAO24540.1| At5g09770 [Arabidopsis thaliana] dbj|BAF00072.1| ribsomal protein - like [Arabidopsis thaliana] gb|AED91444.1| Ribosomal 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L17 2.523e-22
Putative Complete
sp_v3.0_unigene154952 SustainPine v3.0 543
• AutoFact: 60S ribosomal protein L23a n=1 Tax=Postia placenta Mad-698-R RepID=B8P0K1_POSPM 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.169e-10
N-terminus
sp_v3.0_unigene155048 SustainPine v3.0 482
• AutoFact: 40S ribosomal protein S18 n=4 Tax=Protostomia RepID=RS18_AEQIR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene155084 SustainPine v3.0 226
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Pediculus humanus corporis RepID=E0W344_PEDHC 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.646e-20
Internal
sp_v3.0_unigene155086 SustainPine v3.0 519
• AutoFact: ribosomal protein L23a [Argopecten irradians] 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
N-terminus
sp_v3.0_unigene155093 SustainPine v3.0 237
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene155238 SustainPine v3.0 425
• AutoFact: PREDICTED: similar to ribosomal protein S11-2 isoform 1 [Tribolium castaneum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.14e-35
C-terminus
sp_v3.0_unigene155249 SustainPine v3.0 411
• AutoFact: Putative ribosomal protein L12e n=1 Tax=Maconellicoccus hirsutus RepID=A2I468_MACHI 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 1.325e-07
C-terminus
sp_v3.0_unigene155267 SustainPine v3.0 403
• AutoFact: Ribosomal protein L11 n=1 Tax=Dictyostelium purpureum RepID=F1A1I6_DICPU 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L11 2.445e-11
C-terminus
sp_v3.0_unigene155292 SustainPine v3.0 504
• AutoFact: Ribosomal protein S9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6E9_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.94273e-44
N-terminus
sp_v3.0_unigene155301 SustainPine v3.0 358
• AutoFact: Ribosomal protein L37 n=2 Tax=Onchocercidae RepID=A8P3W2_BRUMA 6.0e-25
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain