Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene153283 SustainPine v3.0 213
• AutoFact: 30S ribosomal protein S19 n=13 Tax=cellular organisms RepID=RS19_FLAJ1 2.0e-31
• FL-Next: sp=30S ribosomal protein S19, chloroplastic; Pseudotsuga menziesii var. menziesii. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S19, chloroplastic 0.0
Putative C-terminus
sp_v3.0_unigene153284 SustainPine v3.0 420
• AutoFact: PREDICTED: ribosomal protein L11-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF8D 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene153353 SustainPine v3.0 509
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene153377 SustainPine v3.0 407
• AutoFact: Ribosomal protein L23a n=2 Tax=Chlamydomonadales RepID=A8J239_CHLRE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
N-terminus
sp_v3.0_unigene153380 SustainPine v3.0 609
• AutoFact: S9 n=1 Tax=Suberites domuncula RepID=Q4KTD3_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.8026e-44
Putative Complete
sp_v3.0_unigene153406 SustainPine v3.0 226
• AutoFact: Protein component of the small (40S) ribosomal subunit n=1 Tax=Pichia angusta DL-1 RepID=E7R2M9_PICAD 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.009e-35
Putative C-terminus
sp_v3.0_unigene153417 SustainPine v3.0 491
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Microcosmus squamiger RepID=E3PQX3_9ASCI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene153485 SustainPine v3.0 284
• AutoFact: 60S ribosomal protein L12-3 [Arabidopsis thaliana] sp|Q9FF52.1|RL123_ARATH RecName: Full=60S ribosomal protein L12-3 dbj|BAB09840.1| 60S ribosomal protein L12 [Arabidopsis thaliana] gb|AAK62669.1| AT5g60670/mup24_80 [Arabidopsis thaliana] gb|AAL77726.1| A 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.396e-08
C-terminus
sp_v3.0_unigene153703 SustainPine v3.0 527
• AutoFact: [J] COG0522 Ribosomal protein S4 and related proteins 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Putative C-terminus
sp_v3.0_unigene153740 SustainPine v3.0 447
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Schizosaccharomyces RepID=RL12_SCHPO 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.29e-15
Putative N-terminus
sp_v3.0_unigene153754 SustainPine v3.0 400
• AutoFact: 60S ribosomal protein L12, putative n=3 Tax=Chromadorea RepID=A8NPJ4_BRUMA 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.004e-15
C-terminus
sp_v3.0_unigene153767 SustainPine v3.0 401
• AutoFact: 60S ribosomal protein L12 n=4 Tax=Sordariomycetes RepID=Q2HAZ9_CHAGB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
Putative N-terminus
sp_v3.0_unigene153817 SustainPine v3.0 116
• AutoFact: 40S ribosomal protein S11, putative n=6 Tax=Plasmodium RepID=A5K7Q0_PLAVS 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.999e-32
Internal
sp_v3.0_unigene153874 SustainPine v3.0 431
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_0 n=3 Tax=Blastocystis hominis RepID=D8LWQ9_BLAHO 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.212e-15
C-terminus
sp_v3.0_unigene153943 SustainPine v3.0 441
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Putative N-terminus
sp_v3.0_unigene154149 SustainPine v3.0 376
• AutoFact: RS11, ribosomal protein 11 40S small ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C1P3_THAPS 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.286e-35
C-terminus
sp_v3.0_unigene154194 SustainPine v3.0 491
• AutoFact: 40S ribosomal protein S11 [Ajellomyces capsulatus NAm1] gb|EDN11320.1| 40S ribosomal protein S11 [Ajellomyces capsulatus NAm1] gb|EEH03314.1| 40S ribosomal protein S11 [Ajellomyces capsulatus G186AR] gb|EGC42757.1| 40S ribosomal protein S11 [Ajellomyces c 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.401e-28
N-terminus
sp_v3.0_unigene154274 SustainPine v3.0 274
• AutoFact: Putative ribosomal protein S4 (Fragment) n=1 Tax=Barentsia elongata RepID=A8UAC7_9BILA 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 5.305e-11
C-terminus
sp_v3.0_unigene154310 SustainPine v3.0 308
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 4.92e-12
N-terminus
sp_v3.0_unigene154335 SustainPine v3.0 295
• AutoFact: U3 small nucleolar ribonucleoprotein protein IMP3 p n=1 Tax=Albugo laibachii Nc14 RepID=F0W7J4_9STRA 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein-like 1.666e-06
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain