Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150834 SustainPine v3.0 301
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=Plasmodium RepID=A5K9F8_PLAVS 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 7.00649e-45
Putative C-terminus
sp_v3.0_unigene150872 SustainPine v3.0 297
• AutoFact: 40S ribosomal protein S9, putative n=2 Tax=Sarcocystidae RepID=B9PQU8_TOXGO 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 9.80909e-45
Internal
sp_v3.0_unigene150881 SustainPine v3.0 356
• AutoFact: Ribosomal protein L37 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDA7_PHYIT 5.0e-37
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene150918 SustainPine v3.0 467
• AutoFact: PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150971 SustainPine v3.0 216
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Trichinella spiralis RepID=E5S703_TRISP 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.889e-12
C-terminus
sp_v3.0_unigene151029 SustainPine v3.0 486
• AutoFact: ribosomal protein L11-like protein [Solanum palustre] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene151040 SustainPine v3.0 310
• AutoFact: 40S ribosomal protein S9 n=2 Tax=Aspergillus fumigatus RepID=Q4WWT2_ASPFU 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.12104e-44
Internal
sp_v3.0_unigene151085 SustainPine v3.0 354
• AutoFact: 50S ribosomal protein L5 n=1 Tax=Chlorobium limicola DSM 245 RepID=RL5_CHLL2 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L5, chloroplastic 0.0
Putative C-terminus
sp_v3.0_unigene151115 SustainPine v3.0 335
• AutoFact: 30S ribosomal protein S11 n=4 Tax=cellular organisms RepID=RS11_FLAJ1 4.0e-17
• FL-Next: sp=30S ribosomal protein S11, chloroplastic 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 2.372e-14
C-terminus
sp_v3.0_unigene151145 SustainPine v3.0 273
• AutoFact: 40S ribosomal protein S11 [Plasmodium vivax SaI-1] ref|XP_002258883.1| 40s ribosomal protein s11 [Plasmodium knowlesi strain H] gb|EDL44809.1| 40S ribosomal protein S11, putative [Plasmodium vivax] emb|CAQ39656.1| 40s ribosomal protein s11, putative [Plas 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 1.003e-31
C-terminus
sp_v3.0_unigene151155 SustainPine v3.0 340
• AutoFact: 60S ribosomal protein L11, putative n=1 Tax=Babesia bovis RepID=A7AQT8_BABBO 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene151225 SustainPine v3.0 534
• AutoFact: 40S ribosomal protein S11 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHB6_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.401e-28
Complete
sp_v3.0_unigene151299 SustainPine v3.0 299
• AutoFact: 30S ribosomal protein S11 n=5 Tax=Betaproteobacteria RepID=RS11_AZOSB 8.0e-40
• FL-Next: sp=30S ribosomal protein S11, chloroplastic; Larix decidua (European larch). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 0.0
Putative N-terminus
sp_v3.0_unigene151307 SustainPine v3.0 152
• AutoFact: 50S ribosomal protein L5 n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CJV3_ROBBH 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L5, chloroplastic 5.695e-14
Internal
sp_v3.0_unigene151318 SustainPine v3.0 424
• AutoFact: 30S ribosomal protein S5 n=3 Tax=Flavobacteriales RepID=RS5_FLAPJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S5, chloroplastic 8.752e-25
C-terminus
sp_v3.0_unigene151357 SustainPine v3.0 229
• AutoFact: Ribosomal protein S12, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT12_ACACA 2.0e-36
• FL-Next: sp=Ribosomal protein S12, mitochondrial; Pinus sylvestris (Scots pine). Mitochondrion. 0.0
• Sma3: Ribosomal protein S12 0.0
Putative C-terminus
sp_v3.0_unigene151523 SustainPine v3.0 411
• AutoFact: Ribosomal protein S9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6E9_PFIPI 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.68156e-44
C-terminus
sp_v3.0_unigene151527 SustainPine v3.0 357
• AutoFact: Ribosomal protein S9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6E9_PFIPI 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.68156e-44
C-terminus
sp_v3.0_unigene151534 SustainPine v3.0 383
• AutoFact: Putative ribosomal protein L12e n=1 Tax=Maconellicoccus hirsutus RepID=A2I468_MACHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.542e-19
Internal
sp_v3.0_unigene151562 SustainPine v3.0 551
• AutoFact: Ribosomal protein L37 n=2 Tax=Sclerotiniaceae RepID=A7F605_SCLS1 4.0e-36
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain