Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA replication

Term: GO:0006260  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71966 SustainPine v3.0 347
AutoFact: Unassigned protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72302 SustainPine v3.0 190
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S8E5_RICCO 8.0e-11
FL-Next: tr=Replication factor C / DNA polymerase III gamma-tau subunit, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene72604 SustainPine v3.0 161
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 1.0e-13
FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Sma3: Recombination signal sequence recognition protein 1 9.034e-18
Internal
sp_v3.0_unigene72806 SustainPine v3.0 224
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase 3.515e-23
C-terminus
sp_v3.0_unigene73068 SustainPine v3.0 127
AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein Sb07g022680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene75919 SustainPine v3.0 368
AutoFact: DNA polymerase theta subunit n=2 Tax=Arabidopsis RepID=Q588V7_ARATH 1.0e-33
FL-Next: tr=DNA polymerase theta, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene75989 SustainPine v3.0 204
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.142e-09
N-terminus
sp_v3.0_unigene76041 SustainPine v3.0 268
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene77481 SustainPine v3.0 315
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M8I7_ARALL 6.0e-39
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ribonucleoside-diphosphate reductase 0.0
Internal
sp_v3.0_unigene78993 SustainPine v3.0 123
AutoFact: Unassigned protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79564 SustainPine v3.0 330
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene80276 SustainPine v3.0 153
AutoFact: DNA polymerase lambda [Oryza sativa Japonica Group] 1.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene80484 SustainPine v3.0 139
AutoFact: DNA polymerase lambda subunit [Arabidopsis thaliana] emb|CAC21394.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ABE65612.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ADM33939.1| DNA pol lambda [Arabidopsis thaliana] gb|AEE28588.1| DNA polymeras 3.0e-12
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: DNA polymerase lambda 2.116e-09
Internal
sp_v3.0_unigene80496 SustainPine v3.0 263
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 2.851e-07
Internal
sp_v3.0_unigene81061 SustainPine v3.0 155
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene81638 SustainPine v3.0 142
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 7.815e-10
Internal
sp_v3.0_unigene93608 SustainPine v3.0 1438
AutoFact: E2F target protein 1 [Arabidopsis thaliana] sp|Q501D5.1|MCMBP_ARATH RecName: Full=Mini-chromosome maintenance complex-binding protein; Short=MCM-BP; Short=MCM-binding protein; AltName: Full=Protein E2F TARGET GENE 1 gb|AAY25444.1| At2g40550 [Arabidopsis t 0.0
FL-Next: sp=Mini-chromosome maintenance complex-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At2g40550 3.705e-10
N-terminus
sp_v3.0_unigene93835 SustainPine v3.0 733
AutoFact: origin recognition complex3 [Oryza sativa Japonica Group] 8.0e-09
FL-Next: tr=Origin recognition complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Os10g0402200 protein 8.772e-06
C-terminus
sp_v3.0_unigene94189 SustainPine v3.0 368
AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene94558 SustainPine v3.0 622
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase delta small subunit 8.437e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain