Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA replication

Term: GO:0006260  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62544 SustainPine v3.0 197
AutoFact: Ribonucleoside-diphosphate reductase small chain C n=4 Tax=Arabidopsis RepID=RIR2C_ARATH 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62709 SustainPine v3.0 166
AutoFact: Probable histone-binding protein Caf1 n=24 Tax=Coelomata RepID=CAF1_DROME 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63053 SustainPine v3.0 327
AutoFact: DNA polymerase (Fragment) n=2 Tax=Triticum aestivum RepID=D8L9N3_WHEAT 7.0e-39
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene63324 SustainPine v3.0 139
AutoFact: Ribonucleoside-diphosphate reductase n=2 Tax=Trichocomaceae RepID=B8LTT9_TALSN 6.0e-09
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64037 SustainPine v3.0 244
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8SJP8_SELML 4.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene64144 SustainPine v3.0 283
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SSU6_RICCO 3.0e-28
FL-Next: sp=DNA polymerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA polymerase 1.099e-23
Internal
sp_v3.0_unigene64884 SustainPine v3.0 151
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 5.0e-11
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.912e-07
Internal
sp_v3.0_unigene65712 SustainPine v3.0 353
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Facilitates chromatin transcription complex subunit SPT16 3.108e-13
Internal
sp_v3.0_unigene65818 SustainPine v3.0 228
AutoFact: Replication factor C 38 kDa subunit n=6 Tax=Poaceae RepID=Q84N07_ORYSJ 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66976 SustainPine v3.0 245
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9MYH6_POPTR 9.0e-29
FL-Next: sp=DNA polymerase; subsp. trichocarpa). 0.0
Sma3: DNA polymerase 2.672e-35
Internal
sp_v3.0_unigene67430 SustainPine v3.0 307
AutoFact: origin recognition complex subunit 3 [Arabidopsis thaliana] gb|AAT37463.1| origin recognition complex protein 3 [Arabidopsis thaliana] gb|AED92326.1| origin recognition complex subunit 3 [Arabidopsis thaliana] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene67846 SustainPine v3.0 214
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene68487 SustainPine v3.0 123
AutoFact: DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene68941 SustainPine v3.0 211
AutoFact: DNA polymerase n=4 Tax=Arabidopsis RepID=Q9ZVC8_ARATH 6.0e-11
FL-Next: sp=DNA polymerase; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: DNA polymerase 1.579e-23
Internal
sp_v3.0_unigene69279 SustainPine v3.0 307
AutoFact: Similarity to DNA polymerase III n=1 Tax=Arabidopsis thaliana RepID=Q9FK71_ARATH 2.0e-24
FL-Next: tr=Similarity to DNA polymerase III; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70101 SustainPine v3.0 333
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 2.0e-31
FL-Next: tr=Replication factor C / DNA polymerase III gamma-tau subunit, putative; Ricinus communis (Castor bean). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 5.416e-14
Internal
sp_v3.0_unigene71009 SustainPine v3.0 386
AutoFact: DNA replication helicase dna2, putative n=1 Tax=Ricinus communis RepID=B9SKI5_RICCO 3.0e-17
FL-Next: tr=Putative uncharacterized protein Sb06g026800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene71783 SustainPine v3.0 139
AutoFact: Unassigned protein 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71861 SustainPine v3.0 295
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 2.0e-28
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Internal
sp_v3.0_unigene71901 SustainPine v3.0 223
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SAY6_RICCO 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain