Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA replication

Term: GO:0006260  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52869 SustainPine v3.0 322
AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene53261 SustainPine v3.0 331
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SSU6_RICCO 0.0
FL-Next: sp=DNA polymerase; Ricinus communis (Castor bean). 0.0
Sma3: DNA polymerase 4.748e-35
Internal
sp_v3.0_unigene53275 SustainPine v3.0 229
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 6.0e-31
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene53283 SustainPine v3.0 218
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 1.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 2.752e-09
N-terminus
sp_v3.0_unigene53365 SustainPine v3.0 431
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 1.0e-10
FL-Next: tr=DNA polymerase I family protein expressed; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene54319 SustainPine v3.0 343
AutoFact: origin recognition complex subunit 3 [Arabidopsis thaliana] gb|AAT37463.1| origin recognition complex protein 3 [Arabidopsis thaliana] gb|AED92326.1| origin recognition complex subunit 3 [Arabidopsis thaliana] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene55201 SustainPine v3.0 316
AutoFact: DNA replication helicase n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XML5_GROCL 1.0e-20
FL-Next: tr=DNA replication helicase dna2, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene55918 SustainPine v3.0 383
AutoFact: Nucleosome binding protein n=7 Tax=Ajellomyces RepID=C5G7F6_AJEDR 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56753 SustainPine v3.0 429
AutoFact: Unassigned protein
FL-Next: sp=DNA polymerase; Zea mays (Maize). Plasmid S-1. 0.0
Sma3: Orf297a protein 4.873e-06
Internal
sp_v3.0_unigene57808 SustainPine v3.0 148
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Weeksella virosa DSM 16922 RepID=F0NXD8_WEEVC 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58013 SustainPine v3.0 274
AutoFact: DNA polymerase theta subunit n=2 Tax=Arabidopsis RepID=Q588V7_ARATH 2.0e-33
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene58749 SustainPine v3.0 359
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.017e-10
Internal
sp_v3.0_unigene59230 SustainPine v3.0 207
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 6.0e-12
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 5.95e-14
Internal
sp_v3.0_unigene59919 SustainPine v3.0 338
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 3.0e-24
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.944e-17
Internal
sp_v3.0_unigene60333 SustainPine v3.0 392
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene61305 SustainPine v3.0 188
AutoFact: Ribonucleoside-diphosphate reductase small chain C n=4 Tax=Arabidopsis RepID=RIR2C_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonucleoside-diphosphate reductase small chain 8.059e-11
Internal
sp_v3.0_unigene62061 SustainPine v3.0 240
AutoFact: DNA ligase 4 n=2 Tax=Arabidopsis RepID=DNLI4_ARATH 3.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.004e-10
Internal
sp_v3.0_unigene62114 SustainPine v3.0 134
AutoFact: DNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9SGD5_ARATH 4.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 3.605e-32
Internal
sp_v3.0_unigene62292 SustainPine v3.0 204
AutoFact: DNA polymerase theta, putative n=1 Tax=Ricinus communis RepID=B9RS63_RICCO 5.0e-13
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene62444 SustainPine v3.0 248
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 2.0e-08
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain