Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA replication

Term: GO:0006260  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40725 SustainPine v3.0 661
AutoFact: [L] COG2812 DNA polymerase III, gamma/tau subunits 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 4.902e-07
Internal
sp_v3.0_unigene41521 SustainPine v3.0 320
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 9.0e-27
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene41543 SustainPine v3.0 294
AutoFact: AAA-type ATPase family protein n=2 Tax=Arabidopsis thaliana RepID=F4JRP0_ARATH 1.0e-34
FL-Next: tr=AAA-type ATPase family protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 6.345e-07
Internal
sp_v3.0_unigene41771 SustainPine v3.0 869
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene41852 SustainPine v3.0 264
AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43091 SustainPine v3.0 225
AutoFact: DNA polymerase n=2 Tax=Nicotiana tabacum RepID=Q3LHS9_TOBAC 1.0e-24
FL-Next: tr=DNA polymerase; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative PolI-like DNA polymerase 1.195e-08
Internal
sp_v3.0_unigene43198 SustainPine v3.0 124
AutoFact: DNA pol lambda n=3 Tax=Arabidopsis RepID=Q9FNY4_ARATH 3.0e-09
FL-Next: tr=DNA pol lambda; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase lambda 1.607e-09
Internal
sp_v3.0_unigene43284 SustainPine v3.0 189
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 1.0e-16
FL-Next: tr=DNA polymerase A family protein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative PolI-like DNA polymerase 1.745e-08
Internal
sp_v3.0_unigene43700 SustainPine v3.0 930
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene44125 SustainPine v3.0 290
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SN27_VITVI 1.0e-34
FL-Next: sp=DNA polymerase; Vitis vinifera (Grape). 0.0
Sma3: DNA polymerase 8.296e-21
Internal
sp_v3.0_unigene45112 SustainPine v3.0 596
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene46143 SustainPine v3.0 885
AutoFact: DNA primase [Arabidopsis thaliana] gb|AAU44591.1| hypothetical protein AT5G52800 [Arabidopsis thaliana] gb|AED96262.1| DNA primase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene46288 SustainPine v3.0 300
AutoFact: DNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8RS33_SELML 3.0e-40
FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA polymerase 5.481e-29
Internal
sp_v3.0_unigene46321 SustainPine v3.0 354
AutoFact: putative DNA polymerase alpha subunit [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene46478 SustainPine v3.0 251
AutoFact: AAA-type ATPase-like protein [Arabidopsis thaliana] gb|AAF82285.1|AF264023_1 STICHEL [Arabidopsis thaliana] gb|AAC18938.2| similar to prokaryotic DNA polymerase III gamma subunit [Arabidopsis thaliana] gb|AEC05585.1| AAA-type ATPase-like protein [Arabidop 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 7.309e-14
Internal
sp_v3.0_unigene46519 SustainPine v3.0 267
AutoFact: Putataive DNA polymerase delta small subunit [Oryza sativa Japonica Group] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase delta small subunit 6.381e-14
Internal
sp_v3.0_unigene46550 SustainPine v3.0 249
AutoFact: Unassigned protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene46884 SustainPine v3.0 117
AutoFact: DNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9SGD5_ARATH 1.0e-14
FL-Next: sp=DNA polymerase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase 4.748e-35
Internal
sp_v3.0_unigene47603 SustainPine v3.0 896
AutoFact: Single-strand binding protein (ISS) [Ostreococcus tauri] emb|CAL50423.1| Single-strand binding protein (ISS) [Ostreococcus tauri] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene48207 SustainPine v3.0 479
AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 7.0e-23
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain