Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA replication

Term: GO:0006260  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene130286 SustainPine v3.0 312
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 3.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene130710 SustainPine v3.0 211
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 1.0e-23
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene131770 SustainPine v3.0 264
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 2.0e-29
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene132887 SustainPine v3.0 239
AutoFact: origin recognition complex subunit 2 [Zea mays] gb|AAL10453.1|AF417482_1 origin recognition complex subunit 2 [Zea mays] gb|ACG42340.1| origin recognition complex subunit 2 [Zea mays] 2.0e-11
FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os03g0184700 protein 8.285e-06
Internal
sp_v3.0_unigene135583 SustainPine v3.0 478
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 2.0e-34
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 7.927e-21
Internal
sp_v3.0_unigene135681 SustainPine v3.0 433
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAJ6_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.633e-09
Putative C-terminus
sp_v3.0_unigene137425 SustainPine v3.0 340
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137659 SustainPine v3.0 362
AutoFact: DNA polymerase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KI06_ARALL 3.0e-17
FL-Next: sp=DNA polymerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA polymerase 8.238e-07
Internal
sp_v3.0_unigene138877 SustainPine v3.0 312
AutoFact: DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene141007 SustainPine v3.0 352
AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142585 SustainPine v3.0 489
AutoFact: DNA replication complex GINS protein PSF2 [Arabidopsis thaliana] gb|AAG51015.1|AC069474_14 unknown protein; 54066-55190 [Arabidopsis thaliana] gb|AEE75208.1| DNA replication complex GINS protein PSF2 [Arabidopsis thaliana] 1.0e-37
FL-Next: sp=DNA replication complex GINS protein PSF2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA replication complex GINS protein PSF2 4.232e-09
C-terminus
sp_v3.0_unigene150128 SustainPine v3.0 285
AutoFact: Replication factor C subunit n=1 Tax=Dictyostelium fasciculatum RepID=F4Q8U6_9MYCE 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene150945 SustainPine v3.0 168
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FMM0_FLAJ1 1.0e-27
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ribonucleoside-diphosphate reductase 0.0
Internal
sp_v3.0_unigene152377 SustainPine v3.0 525
AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene153818 SustainPine v3.0 377
AutoFact: PREDICTED: ribonucleotide reductase M2 polypeptide-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9528 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonucleoside-diphosphate reductase small chain 9.178e-11
Internal
sp_v3.0_unigene154429 SustainPine v3.0 394
AutoFact: mitochondrial DNA polymerase A [Dictyostelium discoideum AX4] gb|AAO12053.1| mitochondrial DNA polymerase A [Dictyostelium discoideum] gb|EAL73185.1| mitochondrial DNA polymerase A [Dictyostelium discoideum AX4] 6.0e-33
FL-Next: tr=DNA polymerase I; Nannochloropsis gaditana CCMP526. 0.0
Sma3: Putative PolI-like DNA polymerase 2.668e-08
Internal
sp_v3.0_unigene154828 SustainPine v3.0 493
AutoFact: ATP-dependent DNA helicase RecG n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR77_CHIPD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155635 SustainPine v3.0 322
AutoFact: Mitochondrial DNA polymerase A n=1 Tax=Dictyostelium discoideum RepID=Q8I7W9_DICDI 2.0e-34
FL-Next: tr=DNA polymerase I; Nannochloropsis gaditana CCMP526. 0.0
Sma3: Putative PolI-like DNA polymerase 2.668e-08
Internal
sp_v3.0_unigene156280 SustainPine v3.0 357
AutoFact: Ribonucleoside-diphosphate reductase small chain, putative n=3 Tax=Trypanosoma cruzi RepID=E7LK75_TRYCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonucleoside-diphosphate reductase small chain 9.374e-11
Internal
sp_v3.0_unigene156687 SustainPine v3.0 272
AutoFact: DNA replication factor C subunit Rfc4 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU6_9EUKA 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Replication factor c, subunit 2 2.409e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain