Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ER to Golgi vesicle-mediated transport

Term: GO:0006888  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65682 SustainPine v3.0 300
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 6.666e-13
Internal
sp_v3.0_unigene67084 SustainPine v3.0 238
• AutoFact: Protein transport protein Sec24-like CEF n=4 Tax=Arabidopsis RepID=SC24C_ARATH 3.0e-11
• FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene68021 SustainPine v3.0 245
• AutoFact: Ras-related gtp-binding protein n=2 Tax=Micromonas RepID=C1E029_MICSR 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.623e-08
Internal
sp_v3.0_unigene75002 SustainPine v3.0 87
• AutoFact: transport protein sec24-like CEF [Arabidopsis thaliana] gb|AEE77894.1| transport protein sec24-like CEF [Arabidopsis thaliana] 3.0e-06
• FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75203 SustainPine v3.0 240
• AutoFact: root hair defective 3 GTP-binding protein [Triticum aestivum] 6.0e-19
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein SEY1, putative 1.426e-09
Putative N-terminus
sp_v3.0_unigene79442 SustainPine v3.0 300
• AutoFact: Protein transport protein Sec24C, putative n=1 Tax=Ricinus communis RepID=B9RJ34_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein transport protein Sec24C, putative 3.155e-08
Internal
sp_v3.0_unigene94303 SustainPine v3.0 479
• AutoFact: Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana] sp|Q9FKE9.1|RD3H2_ARATH RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2; AltName: Full=Protein SEY1 homolog 3 dbj|BAB11389.1| GTP-binding protein-like; root hair defective 3 pro 1.96182e-44
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein SEY1, putative 1.902e-09
Internal
sp_v3.0_unigene96655 SustainPine v3.0 425
• AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 2.0e-20
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene97507 SustainPine v3.0 321
• AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene97646 SustainPine v3.0 317
• AutoFact: Putative GTP-binding protein [Arabidopsis thaliana] 1.0e-06
• FL-Next: Isoform 2 of Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana GN=RHD3 0.0
• Sma3: Protein SEY1, putative 1.283e-09
Internal
sp_v3.0_unigene105394 SustainPine v3.0 306
• AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 7.0e-26
• FL-Next: tr=Chromosome structural maintenance protein-like; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene107197 SustainPine v3.0 264
• AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 2.0e-20
• FL-Next: tr=Protein transport protein sec23, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Putative transport protein 7.41e-07
Internal
sp_v3.0_unigene109012 SustainPine v3.0 421
• AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9RQ05_RICCO 0.0
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein SEY1, putative 3.335e-09
Internal
sp_v3.0_unigene109103 SustainPine v3.0 270
• AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene112029 SustainPine v3.0 122
• AutoFact: Protein ROOT HAIR DEFECTIVE 3 homolog 2 n=2 Tax=Oryza sativa RepID=RD3H2_ORYSJ 4.0e-11
• FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3 homolog 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Protein SEY1, putative 1.426e-09
Internal
sp_v3.0_unigene113271 SustainPine v3.0 620
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 7.024e-22
N-terminus
sp_v3.0_unigene127258 SustainPine v3.0 582
• AutoFact: Ras-related protein ric1 (Fragment) n=2 Tax=Oryza sativa Indica Group RepID=A6N1N5_ORYSI 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 4.215e-11
C-terminus
sp_v3.0_unigene127471 SustainPine v3.0 1067
• AutoFact: PREDICTED: similar to Ras-related protein ORAB-1 n=1 Tax=Ciona intestinalis RepID=UPI0000523C85 1.0e-30
• FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
• Sma3: GTP-binding protein 7.73e-13
C-terminus
sp_v3.0_unigene142782 SustainPine v3.0 465
• AutoFact: synbindin-like [Oryza sativa Japonica Group] dbj|BAD69061.1| synbindin-like [Oryza sativa Japonica Group] 5.0e-14
• FL-Next: tr=Trafficking protein particle complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative N-terminus
sp_v3.0_unigene143016 SustainPine v3.0 314
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SKW6_PHYPA 1.0e-24
• FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain