Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ER to Golgi vesicle-mediated transport

Term: GO:0006888  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene23936 SustainPine v3.0 1517
AutoFact: Ras-related protein RABE1c n=6 Tax=rosids RepID=RAE1C_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 3.466e-13
Complete
sp_v3.0_unigene24537 SustainPine v3.0 709
AutoFact: Ras-related protein Rab-1A n=52 Tax=Eukaryota RepID=RAB1A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 1.338e-19
Complete
sp_v3.0_unigene29808 SustainPine v3.0 988
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 4.127e-19
Complete
sp_v3.0_unigene30016 SustainPine v3.0 710
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 3.776e-20
N-terminus
sp_v3.0_unigene34211 SustainPine v3.0 875
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Protein transport protein sec23, putative 5.786e-11
Internal
sp_v3.0_unigene34701 SustainPine v3.0 940
AutoFact: sec23/sec24 transport family protein [Arabidopsis thaliana] gb|AAD15598.1| expressed protein [Arabidopsis thaliana] gb|AAK96686.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56782.1| At2g27460 [Arabidopsis thaliana] gb|AEC07999.1| sec23/sec24 transport 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene36618 SustainPine v3.0 558
AutoFact: SNARE-like protein n=7 Tax=rosids RepID=F4HTY0_ARATH 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative TRAPP subunit 8.982e-10
N-terminus
sp_v3.0_unigene37919 SustainPine v3.0 629
AutoFact: Collagen multi-domain protein 4.0e-11
coding
sp_v3.0_unigene37934 SustainPine v3.0 996
AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 4.763e-20
Complete
sp_v3.0_unigene39952 SustainPine v3.0 146
AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40186 SustainPine v3.0 536
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein transport protein sec23, putative 2.251e-11
N-terminus
sp_v3.0_unigene46250 SustainPine v3.0 997
AutoFact: Protein ROOT HAIR DEFECTIVE 3 homolog 1 n=2 Tax=Arabidopsis RepID=RD3H1_ARATH 0.0
FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein SEY1, putative 4.296e-09
N-terminus
sp_v3.0_unigene53238 SustainPine v3.0 164
AutoFact: Putative Ras-related protein Rab-1C n=2 Tax=Theria RepID=RAB1C_HUMAN 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 2.309e-11
Internal
sp_v3.0_unigene54628 SustainPine v3.0 357
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9RN42_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene57067 SustainPine v3.0 139
AutoFact: Sedlin_N domain containing protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene61983 SustainPine v3.0 262
AutoFact: Ras-related gtp-binding protein n=2 Tax=Micromonas RepID=C1E029_MICSR 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.143e-12
Internal
sp_v3.0_unigene63062 SustainPine v3.0 118
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63596 SustainPine v3.0 212
AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9RQ05_RICCO 2.0e-31
FL-Next: Isoform 2 of Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana GN=RHD3 0.0
Sma3: Protein SEY1, putative 3.922e-09
Internal
sp_v3.0_unigene64512 SustainPine v3.0 149
AutoFact: putative Sec24-like COPII protein [Arabidopsis thaliana] 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65269 SustainPine v3.0 262
AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 3.243e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain