Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: regulation of transcription from RNA polymerase II promoter

Term: GO:0006357  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene149646 SustainPine v3.0 416
AutoFact: Suppressor of ty, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SEX9_RICCO 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 1.186e-07
Internal
sp_v3.0_unigene159382 SustainPine v3.0 170
AutoFact: putative elongation factor (ISS) [Ostreococcus tauri] emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri] 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene161301 SustainPine v3.0 347
AutoFact: Global transcription factor group n=2 Tax=Populus trichocarpa RepID=B9HDT6_POPTR 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene162502 SustainPine v3.0 340
AutoFact: Suppressor of ty, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SEX9_RICCO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 1.186e-07
Internal
sp_v3.0_unigene163289 SustainPine v3.0 162
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 3.314e-10
Internal
sp_v3.0_unigene183277 SustainPine v3.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene198236 SustainPine v3.0 544
AutoFact: transcription elongation factor TFIIS [Schizosaccharomyces pombe 972h-] sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName: Full=TFIIS gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe] emb|CAC 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene200811 SustainPine v3.0 259
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain