Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: outer membrane-bounded periplasmic space

Term: GO:0030288  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4994 SustainPine v3.0 2090
AutoFact: SH3 domain-containing protein [Arabidopsis thaliana] gb|AAL32439.1|AF367774_1 SH3 domain-containing protein 2 [Arabidopsis thaliana] gb|AAL59954.1| unknown protein [Arabidopsis thaliana] gb|AAM20118.1| unknown protein [Arabidopsis thaliana] gb|AAM64716.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin binding protein 1.326e-11
Complete
sp_v3.0_unigene7539 SustainPine v3.0 2695
AutoFact: putrescine-binding periplasmic protein-like protein [Arabidopsis thaliana] gb|AAU05535.1| At1g31410 [Arabidopsis thaliana] gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene8631 SustainPine v3.0 1177
AutoFact: Protein disulfide oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SIV3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9152 SustainPine v3.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene11428 SustainPine v3.0 1319
AutoFact: Protein disulfide oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SIV3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13427 SustainPine v3.0 911
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene20043 SustainPine v3.0 1430
AutoFact: Putative ABC transporter n=2 Tax=Malvoideae RepID=B2ZAR0_GOSRA 0.0
FL-Next: sp=ABC transporter I family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cytochrome c biogenesis ATP-binding export protein ccmA-like 3.564e-09
Complete
sp_v3.0_unigene36416 SustainPine v3.0 1310
AutoFact: DSBA oxidoreductase family protein [Arabidopsis thaliana] dbj|BAB08647.1| frnE protein-like [Arabidopsis thaliana] gb|AAO22793.1| putative frnE protein [Arabidopsis thaliana] gb|AAO42447.1| putative frnE protein [Arabidopsis thaliana] gb|AED94373.1| DSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene47988 SustainPine v3.0 3155
AutoFact: Glutamate receptor n=1 Tax=Ricinus communis RepID=B9RNQ3_RICCO 0.0
FL-Next: sp=Glutamate receptor; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Chromosome undetermined scaffold_107, whole genome shotgun sequence 1.242e-36
Complete
sp_v3.0_unigene56494 SustainPine v3.0 399
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 1.0e-05
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 8.40779e-44
Internal
sp_v3.0_unigene58201 SustainPine v3.0 368
AutoFact: DSBA oxidoreductase family protein n=2 Tax=Arabidopsis RepID=Q9FMB1_ARATH 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene76671 SustainPine v3.0 357
AutoFact: Glutamate receptor n=1 Tax=Nicotiana tabacum RepID=Q84QE2_TOBAC 2.0e-22
FL-Next: sp=Glutamate receptor 2.9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene78999 SustainPine v3.0 364
AutoFact: Glutamate receptor n=1 Tax=Raphanus sativus var. sativus RepID=Q7XAV6_RAPSA 7.0e-31
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene79415 SustainPine v3.0 287
AutoFact: Glutamate receptor n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8F0_PHYPA 9.0e-23
FL-Next: sp=Glutamate receptor 3.4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.02e-14
Internal
sp_v3.0_unigene99021 SustainPine v3.0 354
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-21
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene123844 SustainPine v3.0 445
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 6.0e-22
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene130998 SustainPine v3.0 451
AutoFact: Protein disulfide oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SIV3_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein disulfide oxidoreductase, putative 6.823e-06
C-terminus
sp_v3.0_unigene133998 SustainPine v3.0 283
AutoFact: Unassigned protein 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene143876 SustainPine v3.0 580
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin binding protein 2.745e-12
N-terminus
sp_v3.0_unigene167532 SustainPine v3.0 227
AutoFact: WRKY transcription factor PmWRKY117 (Fragment) n=1 Tax=Pinus monticola RepID=E6Y3E9_PINMO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 8.999e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain