Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 5S rRNA binding

Term: GO:0008097  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene8389 SustainPine v3.0 2651
• AutoFact: RecName: Full=60S ribosomal protein L5 gb|AAQ72789.1| 60S ribosomal protein L5 [Cucumis sativus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14018 SustainPine v3.0 1349
• AutoFact: Ribosomal protein L25 [Medicago truncatula] gb|ACJ84465.1| unknown [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16847 SustainPine v3.0 1537
• AutoFact: ribosomal protein L25 [Nicotiana benthamiana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L25, putative 3.392e-09
Complete
sp_v3.0_unigene21870 SustainPine v3.0 391
• AutoFact: Ribosomal protein L5 (Fragment) n=1 Tax=Branchiostoma lanceolatum RepID=Q86LY6_BRALA 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene24200 SustainPine v3.0 590
• AutoFact: Ribosomal protein L5 n=1 Tax=Glossina morsitans morsitans RepID=D3TQT3_GLOMM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.365e-14
C-terminus
sp_v3.0_unigene24264 SustainPine v3.0 511
• AutoFact: Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Volvox carteri f. nagariensis RepID=D8TTR2_VOLCA 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.41e-14
C-terminus
sp_v3.0_unigene26266 SustainPine v3.0 445
• AutoFact: 60S ribosomal protein L5 n=2 Tax=Onchocercidae RepID=E1GB01_LOALO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.818e-14
N-terminus
sp_v3.0_unigene26324 SustainPine v3.0 1013
• AutoFact: ribosomal protein L5b [Ictalurus punctatus] gb|AAK95129.1|AF401557_1 ribosomal protein L5b [Ictalurus punctatus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.932e-14
Complete
sp_v3.0_unigene27319 SustainPine v3.0 635
• AutoFact: RL5, ribosomal protein 5, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YLN7_THAPS 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
C-terminus
sp_v3.0_unigene28749 SustainPine v3.0 281
• AutoFact: Ribosomal protein L25 [Medicago truncatula] gb|ACJ84465.1| unknown [Medicago truncatula] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L25, putative 4.045e-09
C-terminus
sp_v3.0_unigene30790 SustainPine v3.0 623
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 7.898e-15
C-terminus
sp_v3.0_unigene32719 SustainPine v3.0 612
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 9.501e-15
C-terminus
sp_v3.0_unigene65676 SustainPine v3.0 209
• AutoFact: [J] COG0256 Ribosomal protein L18 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.903e-14
Internal
sp_v3.0_unigene65681 SustainPine v3.0 312
• AutoFact: Ribosomal protein L5, putative n=1 Tax=Ricinus communis RepID=B9SEY9_RICCO 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene73678 SustainPine v3.0 361
• AutoFact: 60s ribosomal protein l5-b n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXM3_COPC7 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73714 SustainPine v3.0 497
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Postia placenta Mad-698-R RepID=B8P326_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.656e-14
Putative C-terminus
sp_v3.0_unigene75305 SustainPine v3.0 313
• AutoFact: [J] COG0256 Ribosomal protein L18 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene102520 SustainPine v3.0 514
• AutoFact: ribosomal protein L25 [Nicotiana benthamiana] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L25 9.341e-09
Putative C-terminus
sp_v3.0_unigene131153 SustainPine v3.0 468
• AutoFact: [J] COG0256 Ribosomal protein L18 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 7.07e-19
Internal
sp_v3.0_unigene132712 SustainPine v3.0 174
• AutoFact: ribosomal protein, putative [Arabidopsis thaliana] 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5-1 6.097e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain