Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosynthesis

Term: GO:0015979  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene73697 SustainPine v3.0 413
AutoFact: isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] gb|EAU93097.1| isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Isopentenyl diphosphate isomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase 3.983e-24
Putative C-terminus
sp_v3.0_unigene75296 SustainPine v3.0 270
AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Cucumis sativus RepID=PSBP_CUCSA 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 5.852e-39
Misassembled
sp_v3.0_unigene76312 SustainPine v3.0 331
AutoFact: Ferritin n=1 Tax=Solanum tuberosum RepID=A7UGG8_SOLTU 1.0e-23
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Putative Complete
sp_v3.0_unigene77466 SustainPine v3.0 232
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II core complex proteins psbY 5.925e-14
C-terminus
sp_v3.0_unigene77562 SustainPine v3.0 299
AutoFact: Putative protein similar to phosphatidylinositol glycan [Oryza sativa Japonica Group] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene79488 SustainPine v3.0 317
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=B8LPN3_PICSI 3.0e-19
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 2.205e-13
Misassembled
sp_v3.0_unigene80061 SustainPine v3.0 250
AutoFact: PSI_PsaH domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene81704 SustainPine v3.0 361
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94597 SustainPine v3.0 458
AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene95241 SustainPine v3.0 858
AutoFact: DUF659 domain containing protein 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene96256 SustainPine v3.0 269
AutoFact: Unassigned protein
FL-Next: tr=ORF40u; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative Complete
sp_v3.0_unigene97342 SustainPine v3.0 344
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene98370 SustainPine v3.0 375
AutoFact: DUF659 domain containing protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene98491 SustainPine v3.0 528
AutoFact: Unassigned protein
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene98601 SustainPine v3.0 531
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Transposase-like protein 3.426e-06
Internal
sp_v3.0_unigene103950 SustainPine v3.0 401
AutoFact: DUF659 domain containing protein 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104314 SustainPine v3.0 167
AutoFact: Photosystem I assembly protein ycf4 n=37 Tax=Pinaceae RepID=YCF4_PINKO 3.0e-25
FL-Next: sp=Photosystem I assembly protein Ycf4; Pinus arizonica. Plastid; Chloroplast. 0.0
Sma3: Photosystem I assembly protein ycf4 0.0
Internal
sp_v3.0_unigene105788 SustainPine v3.0 254
AutoFact: Cytochrome b6 n=9 Tax=Viridiplantae RepID=CYB6_CHLVU 5.0e-24
FL-Next: sp=Cytochrome b6; Podocarpus totara. Plastid; Chloroplast. 0.0
Sma3: Cytochrome b6 0.0
Putative C-terminus
sp_v3.0_unigene105915 SustainPine v3.0 453
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.17587e-43
N-terminus
sp_v3.0_unigene106361 SustainPine v3.0 471
AutoFact: Pyruvate, phosphate dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RSV8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate phosphate dikinase 2.625e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain