Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosynthesis

Term: GO:0015979  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene164125 SustainPine v3.0 374
AutoFact: DUF659 domain containing protein 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT family dimerisation domain containing protein 2.101e-09
Internal
sp_v3.0_unigene164475 SustainPine v3.0 175
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.79e-10
Internal
sp_v3.0_unigene165136 SustainPine v3.0 272
AutoFact: DUF659 domain containing protein 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene165298 SustainPine v3.0 82
AutoFact: Photosystem I assembly protein ycf3 n=3 Tax=Pinus RepID=C1IXQ3_PINCO 2.0e-06
FL-Next: tr=ORF82b; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative C-terminus
sp_v3.0_unigene166387 SustainPine v3.0 451
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 1.953e-06
N-terminus
sp_v3.0_unigene166668 SustainPine v3.0 509
AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PSI-E 2.4e-27
Complete
sp_v3.0_unigene166769 SustainPine v3.0 279
AutoFact: Photosystem I reaction center subunit III n=1 Tax=Vigna radiata var. radiata RepID=Q9XQB4_VIGRR 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I reaction center subunit III, chloroplastic 2.793e-21
Internal
sp_v3.0_unigene166932 SustainPine v3.0 167
AutoFact: DUF659 domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene172794 SustainPine v3.0 310
Sma3: Photosystem I reaction centre, subunit VIII 6.335e-06
coding
sp_v3.0_unigene183370 SustainPine v3.0 523
AutoFact: Ferritin n=1 Tax=Tegillarca granosa RepID=D3JCC5_TEGGR 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene183383 SustainPine v3.0 476
AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-24
FL-Next: tr=Protein dimerization, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene183422 SustainPine v3.0 522
AutoFact: Ferritin n=1 Tax=Sinonovacula constricta RepID=D2JIV0_SINCO 5.60519e-45
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene183617 SustainPine v3.0 626
AutoFact: NADPH:protochlorophyllide oxidoreductase porA (Fragment) n=1 Tax=Pinus strobus RepID=O22599_PINST 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NADPH-protochlorophyllide oxidoreductase 2.013e-23
C-terminus
sp_v3.0_unigene186448 SustainPine v3.0 405
AutoFact: isopentenyl-diphosphate delta-isomerase [Neurospora crassa OR74A] gb|EAA32733.1| isopentenyl-diphosphate delta-isomerase [Neurospora crassa OR74A] dbj|BAG71668.1| isopentenyl diphosphate isomerase [Neurospora crassa] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isopentenyl pyrophosphate isomerase 2.049e-30
N-terminus
sp_v3.0_unigene186476 SustainPine v3.0 954
AutoFact: DUF659 domain containing protein 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 3.017e-08
Putative N-terminus
sp_v3.0_unigene186477 SustainPine v3.0 644
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 2.652e-06
Complete
sp_v3.0_unigene186508 SustainPine v3.0 444
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene187297 SustainPine v3.0 429
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene188060 SustainPine v3.0 489
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene188604 SustainPine v3.0 1022
AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I reaction center subunit IV A 2.837e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain