Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosynthesis

Term: GO:0015979  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene131490 SustainPine v3.0 372
• AutoFact: Putative desaturase-like protein n=1 Tax=Trifolium repens RepID=Q17UU7_TRIRP 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2.185e-32
Misassembled
sp_v3.0_unigene132001 SustainPine v3.0 631
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 3.938e-07
Putative Complete
sp_v3.0_unigene132548 SustainPine v3.0 656
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.606e-23
N-terminus
sp_v3.0_unigene133065 SustainPine v3.0 487
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene133631 SustainPine v3.0 215
• AutoFact: DUF659 domain containing protein 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene140412 SustainPine v3.0 646
• AutoFact: putative photosystem II core complex proteins psbY, chloroplast precursor (L-arginine metabolising enzyme) (L-AME) [Oryza sativa Japonica Group] gb|EAZ05418.1| hypothetical protein OsI_27630 [Oryza sativa Indica Group] dbj|BAG90836.1| unnamed protein prod 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II core complex proteins psbY 1.54e-13
C-terminus
sp_v3.0_unigene140478 SustainPine v3.0 489
• AutoFact: Photosystem I reaction center subunit V, chloroplastic n=4 Tax=rosids RepID=PSAG_ARATH 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit V, chloroplastic 4.393e-12
Putative Complete
sp_v3.0_unigene140538 SustainPine v3.0 491
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 9.00054e-42
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene140827 SustainPine v3.0 635
• AutoFact: RecName: Full=Ferredoxin--NADP reductase, chloroplastic; Short=FNR; Flags: Precursor gb|AAA33029.1| ferredoxin-NADP+ reductase precursor [Mesembryanthemum crystallinum] prf||1604475A ferredoxin NADP reductase 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferredoxin--NADP reductase 2.331e-27
C-terminus
sp_v3.0_unigene141335 SustainPine v3.0 288
• AutoFact: DUF659 domain containing protein 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene141719 SustainPine v3.0 254
• AutoFact: TT_ORF1 multi-domain protein 2.0e-07
putative_coding
sp_v3.0_unigene142292 SustainPine v3.0 991
• AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 5.03066e-42
Complete
sp_v3.0_unigene142424 SustainPine v3.0 578
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene143343 SustainPine v3.0 531
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene143508 SustainPine v3.0 292
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBP_FRIAG 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 1.60028e-42
Internal
sp_v3.0_unigene143793 SustainPine v3.0 450
• AutoFact: Photosystem I reaction center subunit psaK n=1 Tax=Wolffia australiana RepID=E9MW22_9ARAE 9.0e-13
• FL-Next: tr=Chloroplast photosystem I reaction center subunit; Picea wilsonii. 0.0
N-terminus
sp_v3.0_unigene143804 SustainPine v3.0 575
• AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 23 kDa subunit 3.72e-27
N-terminus
sp_v3.0_unigene144938 SustainPine v3.0 562
• AutoFact: Unassigned protein
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.228e-06
Internal
sp_v3.0_unigene145690 SustainPine v3.0 243
• AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-18
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene146225 SustainPine v3.0 539
• AutoFact: Chloroplast photosystem II light-inducible protein n=1 Tax=Pachysandra terminalis RepID=A1XX43_9MAGN 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 10 kDa polypeptide, chloroplastic 6.857e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain