Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosynthesis

Term: GO:0015979  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40 SustainPine v3.0 1403
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene1651 SustainPine v3.0 732
AutoFact: Lipoyl synthase 2, chloroplastic n=1 Tax=Populus trichocarpa RepID=LISC2_POPTR 5.0e-19
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthase-like protein 1.213e-08
N-terminus
sp_v3.0_unigene3249 SustainPine v3.0 1155
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Complete
sp_v3.0_unigene4520 SustainPine v3.0 350
AutoFact: Photosystem I assembly protein ycf3 n=1 Tax=Pinus thunbergii RepID=C3VYX2_PINTH 4.00001e-40
FL-Next: sp=Photosystem I assembly protein ycf3; Pinus arizonica. Plastid; Chloroplast. 0.0
Sma3: Photosystem I assembly protein ycf3 0.0
N-terminus
sp_v3.0_unigene5583 SustainPine v3.0 1296
AutoFact: lipoyl synthase [Arabidopsis thaliana] sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl synthase, chloroplastic; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase, plastidial; Short=LIP1p; AltName: Full=Lipoic acid synthas 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthetase 7.87e-20
C-terminus
sp_v3.0_unigene7387 SustainPine v3.0 1552
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Complete
sp_v3.0_unigene8027 SustainPine v3.0 1199
AutoFact: photosystem I reaction center subunit III [Vigna radiata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8309 SustainPine v3.0 1407
AutoFact: S-adenosyl-L-methionine Mg-protoporphyrin IX methyltranserase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8400 SustainPine v3.0 1148
AutoFact: Photosystem II reaction center psb28 protein n=1 Tax=Picea sitchensis RepID=A9NPG6_PICSI 0.0
FL-Next: sp=Photosystem II reaction center psb28 protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II reaction center psb28 protein 0.0
Complete
sp_v3.0_unigene9642 SustainPine v3.0 1202
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene10871 SustainPine v3.0 1808
AutoFact: Magnesium chelatase ATPase subunit I n=4 Tax=BEP clade RepID=Q53RM0_ORYSJ 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlI, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlI, chloroplast, putative, expressed 0.0
Complete
sp_v3.0_unigene11841 SustainPine v3.0 1448
AutoFact: DUF659 domain containing protein 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11898 SustainPine v3.0 931
AutoFact: Photosystem I reaction center subunit psaK n=1 Tax=Wolffia australiana RepID=E9MW22_9ARAE 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12548 SustainPine v3.0 1155
AutoFact: Pyruvate, phosphate dikinase, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=PPDK_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate phosphate dikinase 2.506e-17
C-terminus
sp_v3.0_unigene12694 SustainPine v3.0 638
AutoFact: putative oxygen evolving complex protein [Oryza sativa Japonica Group] gb|AAM93731.1| putative oxygen evolving complex protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 3.506e-09
C-terminus
sp_v3.0_unigene13119 SustainPine v3.0 471
AutoFact: PSI_8 domain containing protein 1.0e-09
FL-Next: tr=ORF119; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). Plastid; Chloroplast. 0.0
Sma3: Component of photosystem I 3.074e-11
C-terminus
sp_v3.0_unigene14301 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=Cell wall-associated hydrolase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene14655 SustainPine v3.0 124
AutoFact: photosystem I assembly protein Ycf4 [Pinus thunbergii] sp|P41620.1|YCF4_PINTH RecName: Full=Photosystem I assembly protein ycf4 dbj|BAA04362.1| ORF184 [Pinus thunbergii] gb|ACP50846.1| photosystem I assembly protein ycf4 [Pinus resinosa] gb|ACP51154.1| ph 1.0e-10
FL-Next: tr=ORF53d; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Sma3: Photosystem I assembly protein ycf4 3.674e-25
Putative Complete
sp_v3.0_unigene16928 SustainPine v3.0 1377
AutoFact: Oxygen-evolving enhancer protein 3-1, chloroplastic n=3 Tax=Arabidopsis RepID=PSBQ1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16983 SustainPine v3.0 1429
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain