Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chlorophyll biosynthetic process

Term: GO:0015995  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene68344 SustainPine v3.0 289
AutoFact: Uroporphyrinogen decarboxylase 2, chloroplastic n=5 Tax=Poaceae RepID=DCUP2_ORYSJ 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uroporphyrinogen decarboxylase 0.0
C-terminus
sp_v3.0_unigene73697 SustainPine v3.0 413
AutoFact: isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] gb|EAU93097.1| isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Isopentenyl diphosphate isomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase 3.983e-24
Putative C-terminus
sp_v3.0_unigene76546 SustainPine v3.0 292
AutoFact: Delta-aminolevulinic acid dehydratase (Fragment) n=1 Tax=Volvox carteri RepID=Q9AR53_VOLCA 8.0e-28
FL-Next: sp=Delta-aminolevulinic acid dehydratase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Delta-aminolevulinic acid dehydratase 0.0
Internal
sp_v3.0_unigene79848 SustainPine v3.0 295
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 5.0e-28
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose 5-phosphate synthase 3.757e-30
Internal
sp_v3.0_unigene81704 SustainPine v3.0 361
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene93874 SustainPine v3.0 1162
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.335e-09
Internal
sp_v3.0_unigene102045 SustainPine v3.0 934
AutoFact: Uroporphyrinogen decarboxylase n=1 Tax=Ricinus communis RepID=B9SGB6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uroporphyrinogen decarboxylase 0.0
C-terminus
sp_v3.0_unigene102644 SustainPine v3.0 992
AutoFact: COP1-interacting protein 7 (CIP7)-like [Oryza sativa Japonica Group] dbj|BAC21482.1| COP1-interacting protein 7 (CIP7)-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: COP1-interacting protein 7 (CIP7)-like 1.696e-09
N-terminus
sp_v3.0_unigene106003 SustainPine v3.0 186
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3,8-divinyl protochlorophyllide a 8-vinyl reductase 1.089e-13
Internal
sp_v3.0_unigene106933 SustainPine v3.0 382
AutoFact: bHLH transcription factor PTF1-like [Oryza sativa Japonica Group] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.252e-19
N-terminus
sp_v3.0_unigene107145 SustainPine v3.0 321
AutoFact: Uroporphyrinogen decarboxylase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CS92_VITVI 0.0
FL-Next: Isoform 2 of Uroporphyrinogen decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=At3g14930 0.0
Sma3: Uroporphyrinogen decarboxylase 0.0
Internal
sp_v3.0_unigene111686 SustainPine v3.0 471
AutoFact: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=23 Tax=Embryophyta RepID=CHLL_PHYPA 0.0
FL-Next: sp=Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Cupressus sempervirens. Plastid; Chloroplast. 0.0
Sma3: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein 4.395e-39
Internal
sp_v3.0_unigene122682 SustainPine v3.0 318
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3,8-divinyl protochlorophyllide a 8-vinyl reductase 1.34e-13
Internal
sp_v3.0_unigene124701 SustainPine v3.0 817
AutoFact: Geranylgeranyl reductase n=2 Tax=Euphorbiaceae RepID=B7X936_HEVBR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl reductase 5.558e-24
C-terminus
sp_v3.0_unigene128979 SustainPine v3.0 626
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ3_ABIGR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene131470 SustainPine v3.0 424
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type I n=3 Tax=Pinaceae RepID=A7LA00_PICAB 1.0e-18
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type I; Pinus taeda (Loblolly pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.168e-26
Internal
sp_v3.0_unigene131490 SustainPine v3.0 372
AutoFact: Putative desaturase-like protein n=1 Tax=Trifolium repens RepID=Q17UU7_TRIRP 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2.185e-32
Misassembled
sp_v3.0_unigene132705 SustainPine v3.0 458
AutoFact: hydroxymethylbilane synthase [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-uroporphyrinogen synthase 7.908e-09
N-terminus
sp_v3.0_unigene136537 SustainPine v3.0 413
AutoFact: Mg protoporphyrin IX chelatase n=2 Tax=Nicotiana tabacum RepID=O22435_TOBAC 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.06e-09
Internal
sp_v3.0_unigene143197 SustainPine v3.0 1113
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 2; Pinus densiflora (Japanese red pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.254e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain