Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: structural molecule activity

Term: GO:0005198  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene137293 SustainPine v3.0 222
• AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.777e-08
Internal
sp_v3.0_unigene137386 SustainPine v3.0 210
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 2.0e-15
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 5.684e-09
N-terminus
sp_v3.0_unigene137508 SustainPine v3.0 493
• AutoFact: nonclathrin coat protein zeta2-COP [Solanum lycopersicum] 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit zeta-1 1.311e-14
C-terminus
sp_v3.0_unigene137616 SustainPine v3.0 259
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.822e-06
Internal
sp_v3.0_unigene138412 SustainPine v3.0 234
• AutoFact: Unassigned protein
unknown
sp_v3.0_unigene138421 SustainPine v3.0 266
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 1.85e-15
Putative N-terminus
sp_v3.0_unigene140028 SustainPine v3.0 421
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 1.0e-38
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene140374 SustainPine v3.0 1179
• AutoFact: alpha-tubulin [Eucalyptus grandis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.223e-14
Putative Complete
sp_v3.0_unigene140415 SustainPine v3.0 1319
• AutoFact: Plastid lipid-associated protein 2, chloroplastic n=1 Tax=Brassica rapa RepID=PAP2_BRACM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillin 8.231e-12
Complete
sp_v3.0_unigene141244 SustainPine v3.0 411
• AutoFact: Tubulin beta-3 chain (Fragment) n=1 Tax=Anemia phyllitidis RepID=TBB3_ANEPH 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 2.06e-08
Internal
sp_v3.0_unigene141356 SustainPine v3.0 670
• AutoFact: PREDICTED: tubulin beta-8 chain-like n=2 Tax=Macaca mulatta RepID=UPI0001D55545 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 3.651e-08
N-terminus
sp_v3.0_unigene141689 SustainPine v3.0 512
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.025e-17
C-terminus
sp_v3.0_unigene142258 SustainPine v3.0 743
• AutoFact: alpha-tubulin [Eucalyptus grandis] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.563e-11
Putative Complete
sp_v3.0_unigene142280 SustainPine v3.0 1170
• AutoFact: tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|NP_197479.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|XP_002871906.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] ref|XP_002873963.1| tubulin alpha-3 [Arabidopsis lyrata subsp 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.884e-33
Putative Complete
sp_v3.0_unigene142580 SustainPine v3.0 870
• AutoFact: protein transport SEC13-like protein [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142680 SustainPine v3.0 159
unknown
sp_v3.0_unigene142836 SustainPine v3.0 348
• AutoFact: Coatomer subunit epsilon-1 n=7 Tax=Poaceae RepID=COPE1_ORYSJ 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Epsilon1-COP 1.501e-09
Misassembled
sp_v3.0_unigene142921 SustainPine v3.0 394
• AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene143144 SustainPine v3.0 1019
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.242e-28
N-terminus
sp_v3.0_unigene143612 SustainPine v3.0 455
• AutoFact: Nonclathrin coat protein zeta2-COP n=1 Tax=Solanum lycopersicum RepID=Q9MAZ6_SOLLC 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nonclathrin coat protein zeta1-COP 3.93e-18
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain