Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: riboflavin biosynthetic process

Term: GO:0009231  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3832 SustainPine v3.0 2296
• AutoFact: putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4889 SustainPine v3.0 542
• AutoFact: cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] emb|CAB51211.1| putative protein [Arabidopsis thaliana] gb|AEE78275.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene5500 SustainPine v3.0 1795
• AutoFact: putative riboflavin synthase alpha chain [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Complete
sp_v3.0_unigene6546 SustainPine v3.0 1857
• AutoFact: [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.0
• FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: GTP cyclohydrolase II, putative 9.815e-20
Putative Complete
sp_v3.0_unigene6921 SustainPine v3.0 1208
• AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Picea sitchensis RepID=A9NU97_PICSI 0.0
• FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8024 SustainPine v3.0 2023
• AutoFact: GTP cyclohydrolase-2 [Arabidopsis thaliana] sp|P47924.2|RIBBA_ARATH RecName: Full=Riboflavin biosynthesis protein ribBA, chloroplastic; Includes: RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; Includes: RecName: Full=GTP 0.0
• FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: GTP cyclohydrolase II, putative 1.177e-19
Putative Complete
sp_v3.0_unigene8128 SustainPine v3.0 1452
• AutoFact: Riboflavin kinase family protein n=1 Tax=Zea mays RepID=B6TXJ0_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11722 SustainPine v3.0 2822
• AutoFact: GTP cyclohydrolase-2 [Arabidopsis thaliana] sp|P47924.2|RIBBA_ARATH RecName: Full=Riboflavin biosynthesis protein ribBA, chloroplastic; Includes: RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; Includes: RecName: Full=GTP 0.0
• FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: GTP cyclohydrolase II, putative 1.177e-19
Putative Complete
sp_v3.0_unigene13466 SustainPine v3.0 959
• AutoFact: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arabidopsis thaliana] dbj|BAC43311.1| unknown protein [Arabidopsis thaliana] gb|AAP04036.1| unknown protein [Arabidopsis thaliana] gb|AEE84379.1| di 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein T13K14.120 8.285e-06
Putative Complete
sp_v3.0_unigene16742 SustainPine v3.0 1022
• AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Picea sitchensis RepID=B8LPE1_PICSI 0.0
• FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucose-1-phosphate adenylyltransferase 0.0
N-terminus
sp_v3.0_unigene16900 SustainPine v3.0 1377
• AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Ricinus communis RepID=B9R7X6_RICCO 0.0
• FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucose-1-phosphate adenylyltransferase 0.0
N-terminus
sp_v3.0_unigene19367 SustainPine v3.0 495
• AutoFact: cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] emb|CAB51211.1| putative protein [Arabidopsis thaliana] gb|AEE78275.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis thaliana] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene20225 SustainPine v3.0 525
• AutoFact: 'GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase' n=3 Tax=Oryza sativa RepID=Q6L506_ORYSJ 1.0e-09
• FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene31589 SustainPine v3.0 1878
• AutoFact: Riboflavin kinase/fmn adenylyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SFB1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Haloacid dehalogenase-like hydrolase domain-containing protein 1A 1.526e-08
Complete
sp_v3.0_unigene58698 SustainPine v3.0 264
• AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Picea sitchensis RepID=A9NU97_PICSI 9.0e-16
• FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 6,7-dimethyl-8-ribityllumazine synthase 0.0
Putative C-terminus
sp_v3.0_unigene66388 SustainPine v3.0 381
• AutoFact: 6,7-dimethyl-8-ribityllumazine synthase [Arabidopsis thaliana] sp|O80575.1|RISB_ARATH RecName: Full=6,7-dimethyl-8-ribityllumazine synthase, chloroplastic; Short=DMRL synthase; Short=Lumazine synthase; Flags: Precursor gb|AAD44810.1|AF148649_1 6,7-dimethy 3.0e-35
• FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 6,7-dimethyl-8-ribityllumazine synthase 0.0
C-terminus
sp_v3.0_unigene67671 SustainPine v3.0 222
• AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Picea sitchensis RepID=A9NU97_PICSI 9.0e-08
• FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 6,7-dimethyl-8-ribityllumazine synthase 1.729e-31
C-terminus
sp_v3.0_unigene70901 SustainPine v3.0 450
• AutoFact: [H] COG0196 FAD synthase 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72454 SustainPine v3.0 288
• AutoFact: Riboflavin biosynthesis protein ribBA n=10 Tax=Staphylococcus epidermidis RepID=RIBBA_STAEQ 2.0e-28
• FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: GTP cyclohydrolase II, putative 9.922e-13
Internal
sp_v3.0_unigene73860 SustainPine v3.0 298
• AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Populus trichocarpa RepID=B9N8M6_POPTR 1.0e-15
• FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 6,7-dimethyl-8-ribityllumazine synthase 7.717e-39
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain