Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbohydrate binding

Term: GO:0030246  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene167066 SustainPine v3.0 402
• AutoFact: Endo-1,4-beta-glucanase n=1 Tax=Dimocarpus longan RepID=C7EC60_9ROSI 5.0e-40
• FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Endo-1,4-beta-glucanase 5.723e-40
Internal
sp_v3.0_unigene167664 SustainPine v3.0 123
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168038 SustainPine v3.0 353
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.503e-15
Internal
sp_v3.0_unigene183901 SustainPine v3.0 423
• AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 2.00386e-43
• FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Endo-beta-1,4-glucanase 3.825e-37
Internal
sp_v3.0_unigene186890 SustainPine v3.0 609
• AutoFact: PREDICTED: similar to UDP-N-acetylglucosamine transferase subunit ALG13 homolog (Glycosyltransferase 28 domain-containing protein 1) [Tribolium castaneum] gb|EEZ98644.1| hypothetical protein TcasGA2_TC001172 [Tribolium castaneum] 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene187297 SustainPine v3.0 429
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene190884 SustainPine v3.0 336
• AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-31
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 1.692e-10
Putative C-terminus
sp_v3.0_unigene191030 SustainPine v3.0 368
• AutoFact: Aldose-1-epimerase, putative n=2 Tax=Metarhizium RepID=E9DWB1_METAQ 1.00053e-42
• FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
• Sma3: UDP-glucose 4-epimerase-like protein 3.899e-06
Internal
sp_v3.0_unigene193968 SustainPine v3.0 570
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-39
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.18e-18
C-terminus
sp_v3.0_unigene194036 SustainPine v3.0 402
• AutoFact: pfam01263, Aldose_epim, Aldose 1-epimerase 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Apospory-associated protein C 1.729e-14
Internal
sp_v3.0_unigene194160 SustainPine v3.0 161
• AutoFact: Apospory-associated protein C n=2 Tax=Arabidopsis RepID=Q9LVC5_ARATH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldose 1-epimerase, putative 9.887e-22
Internal
sp_v3.0_unigene194350 SustainPine v3.0 332
• AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 4.0e-28
• FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Endo-beta-1,4-glucanase 1.996e-25
C-terminus
sp_v3.0_unigene194657 SustainPine v3.0 500
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene195598 SustainPine v3.0 199
• AutoFact: alpha-mannosidase II [Arabidopsis thaliana] emb|CAC01814.1| alpha-mannosidase-like protein [Arabidopsis thaliana] gb|AAY90120.1| Golgi alpha-mannosidase II [Arabidopsis thaliana] gb|AED92095.1| alpha-mannosidase II [Arabidopsis thaliana] 1.0e-26
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene199382 SustainPine v3.0 447
• AutoFact: Unassigned protein 1.96182e-44
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Putative uncharacterized protein 5.185e-14
C-terminus
sp_v3.0_unigene199445 SustainPine v3.0 526
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.465e-26
Internal
sp_v3.0_unigene201593 SustainPine v3.0 342
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene202436 SustainPine v3.0 505
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene202776 SustainPine v3.0 642
• AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 1.0e-14
• FL-Next: tr=Rhamnogalacturonate lyase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Lyase, putative 3.842e-13
N-terminus
sp_v3.0_unigene202972 SustainPine v3.0 487
• AutoFact: rve domain containing protein 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain