Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: transcription factor TFIID complex

Term: GO:0005669  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2081 SustainPine v3.0 2345
• AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3841 SustainPine v3.0 1836
• AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 0.0
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
Internal
sp_v3.0_unigene5832 SustainPine v3.0 1133
• AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7185 SustainPine v3.0 2963
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Os03g0441000 protein 9.26e-06
C-terminus
sp_v3.0_unigene7407 SustainPine v3.0 1610
• AutoFact: TATA binding protein associated factor [Solanum tuberosum] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene10101 SustainPine v3.0 2664
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 2.634e-26
C-terminus
sp_v3.0_unigene12799 SustainPine v3.0 1208
• AutoFact: TATA-box binding protein, component of TFIID and TFIIIB n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJY7_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TATA-box binding protein, component of TFIID and TFIIIB 0.0
Complete
sp_v3.0_unigene15856 SustainPine v3.0 727
• AutoFact: PREDICTED: similar to TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor n=1 Tax=Vitis vinifera RepID=UPI00019835C9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT1G55300 protein 2.121e-09
N-terminus
sp_v3.0_unigene18084 SustainPine v3.0 913
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transcription initiation factor, putative 9.277e-10
C-terminus
sp_v3.0_unigene28647 SustainPine v3.0 972
• AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
• FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene40178 SustainPine v3.0 381
• AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 2.0e-39
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene42678 SustainPine v3.0 304
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 2.0e-38
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.804e-34
N-terminus
sp_v3.0_unigene42818 SustainPine v3.0 750
• AutoFact: TATA binding protein associated factor [Solanum tuberosum] 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene52419 SustainPine v3.0 399
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 9.0e-29
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 1.787e-26
N-terminus
sp_v3.0_unigene63028 SustainPine v3.0 156
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 4.0e-20
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 4.43e-24
Internal
sp_v3.0_unigene66377 SustainPine v3.0 424
• AutoFact: Transcription initiation factor TFIID subunit A [Arabidopsis thaliana] ref|NP_849680.1| Transcription initiation factor TFIID subunit A [Arabidopsis thaliana] gb|AAL07223.1| unknown protein [Arabidopsis thaliana] gb|AAM14362.1| unknown protein [Arabidopsi 2.0e-08
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene66673 SustainPine v3.0 149
• AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68796 SustainPine v3.0 195
• AutoFact: TATA-box binding protein, component of TFIID and TFIIIB n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJY7_PHYPA 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 2.106e-12
Putative N-terminus
sp_v3.0_unigene72215 SustainPine v3.0 297
• AutoFact: PREDICTED: similar to TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor n=1 Tax=Vitis vinifera RepID=UPI00019835C9 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene75515 SustainPine v3.0 362
• AutoFact: TATA binding protein n=6 Tax=Sordariomycetes RepID=E9E0T2_METAQ 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 2.034e-12
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain