Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription factor TFIID complex

Term: GO:0005669  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene95271 SustainPine v3.0 264
• AutoFact: Queuine tRNA-ribosyltransferase (Fragment) n=3 Tax=rosids RepID=E0CRP9_VITVI 3.0e-39
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.335e-34
Internal
sp_v3.0_unigene100130 SustainPine v3.0 607
• AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene100334 SustainPine v3.0 476
• AutoFact: transcription initiation factor IID (TFIID) subunit A-like protein [Oryza sativa Japonica Group] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene100963 SustainPine v3.0 1040
• AutoFact: PREDICTED: similar to TAF7 (TBP-ASSOCIATED FACTOR 7); general RNA polymerase II transcription factor n=1 Tax=Vitis vinifera RepID=UPI00019835C9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT1G55300 protein 2.121e-09
Putative Complete
sp_v3.0_unigene104522 SustainPine v3.0 253
• AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 5.0e-31
• FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene109765 SustainPine v3.0 181
• AutoFact: Queuine tRNA-ribosyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TIB7_PHYPA 2.0e-15
• FL-Next: sp=Queuine tRNA-ribosyltransferase; Zea mays (Maize). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 1.787e-26
Internal
sp_v3.0_unigene118474 SustainPine v3.0 406
• AutoFact: transcription initiation factor TFIID-1 [Coprinopsis cinerea okayama7#130] gb|EAU88086.1| transcription initiation factor TFIID-1 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 3.032e-12
Putative C-terminus
sp_v3.0_unigene123505 SustainPine v3.0 323
• AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 1.0e-27
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene125390 SustainPine v3.0 273
• AutoFact: Transcription initiation factor TFIID subunit 1 n=5 Tax=Oryza sativa RepID=TAF1_ORYSJ 3.0e-28
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
Internal
sp_v3.0_unigene150135 SustainPine v3.0 411
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 8.00001e-41
• FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 9.447e-27
Internal
sp_v3.0_unigene154461 SustainPine v3.0 444
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 2.0e-34
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 3.963e-25
Putative C-terminus
sp_v3.0_unigene154476 SustainPine v3.0 341
• AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 2.651e-12
Putative N-terminus
sp_v3.0_unigene156271 SustainPine v3.0 441
• AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 2.514e-12
N-terminus
sp_v3.0_unigene157940 SustainPine v3.0 455
• AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 2.651e-12
N-terminus
sp_v3.0_unigene158564 SustainPine v3.0 209
• AutoFact: Related to TAF9-TFIID and SAGA subunit n=1 Tax=Sporisorium reilianum RepID=E6ZWG6_9BASI 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164104 SustainPine v3.0 341
• AutoFact: Queuine tRNA-ribosyltransferase n=4 Tax=Poaceae RepID=Q6K4A3_ORYSJ 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Queuine tRNA-ribosyltransferase 2.804e-34
N-terminus
sp_v3.0_unigene191991 SustainPine v3.0 516
• AutoFact: TATA-box-binding protein n=1 Tax=Acanthamoeba castellanii RepID=TBP_ACACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor TFIID TBP-1 subunit 3.032e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain