Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chromatin

Term: GO:0000785  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene188439 SustainPine v3.0 716
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene188459 SustainPine v3.0 325
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.859e-23
Internal
sp_v3.0_unigene188590 SustainPine v3.0 523
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53PB2_ORYSJ 5.0e-22
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene188781 SustainPine v3.0 904
AutoFact: Trypan_PARP multi-domain protein 5.0e-17
Sma3: Glycine-rich protein 4.645e-14
coding
sp_v3.0_unigene189201 SustainPine v3.0 466
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 1.0e-34
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene189430 SustainPine v3.0 299
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7X6_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.72e-16
Putative Complete
sp_v3.0_unigene189712 SustainPine v3.0 367
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene189881 SustainPine v3.0 346
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.588e-20
Putative C-terminus
sp_v3.0_unigene189889 SustainPine v3.0 495
AutoFact: RVT_1 domain containing protein 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.173e-15
C-terminus
sp_v3.0_unigene190934 SustainPine v3.0 333
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Os08g0344700 protein 8.772e-06
Internal
sp_v3.0_unigene192177 SustainPine v3.0 694
AutoFact: polyprotein [Glycine max] 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 5.375e-10
Putative Complete
sp_v3.0_unigene193698 SustainPine v3.0 372
AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene194254 SustainPine v3.0 506
AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 1.00053e-42
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.18505e-41
Internal
sp_v3.0_unigene194418 SustainPine v3.0 493
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.935e-12
Internal
sp_v3.0_unigene195211 SustainPine v3.0 326
AutoFact: Unassigned protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene196145 SustainPine v3.0 323
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene196179 SustainPine v3.0 474
AutoFact: OSJNBa0004L19.22 protein n=1 Tax=Oryza sativa RepID=Q5JPZ2_ORYSA 3.0e-20
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene196899 SustainPine v3.0 334
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 1.499e-13
Internal
sp_v3.0_unigene197157 SustainPine v3.0 621
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 5.757e-23
Putative C-terminus
sp_v3.0_unigene197250 SustainPine v3.0 139
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.107e-17
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain