Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lipid binding

Term: GO:0008289  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79163 SustainPine v3.0 299
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.637e-35
Internal
sp_v3.0_unigene79288 SustainPine v3.0 463
• AutoFact: Non-specific lipid-transfer protein n=4 Tax=Picea sitchensis RepID=A9NJW4_PICSI 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nonspecific lipid transfer protein 2.049e-15
Misassembled
sp_v3.0_unigene79599 SustainPine v3.0 271
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 3.0e-25
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Nonspecific lipid transfer protein 1.668e-07
Putative C-terminus
sp_v3.0_unigene80125 SustainPine v3.0 92
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
Putative C-terminus
sp_v3.0_unigene80683 SustainPine v3.0 272
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 3.0e-27
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Nonspecific lipid transfer protein 1.144e-07
Putative N-terminus
sp_v3.0_unigene80868 SustainPine v3.0 232
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 6.0e-28
• FL-Next: sp=Non-specific lipid-transfer protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: PrLTP1 2.924e-06
Putative C-terminus
sp_v3.0_unigene81083 SustainPine v3.0 236
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 9.304e-06
Internal
sp_v3.0_unigene81343 SustainPine v3.0 194
• AutoFact: Nonspecific lipid transfer protein (Fragment) n=1 Tax=Pinus taeda RepID=Q94IS5_PINTA 1.0e-06
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus resinosa (Red pine) (Norway pine). 0.0
N-terminus
sp_v3.0_unigene81532 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
N-terminus
sp_v3.0_unigene81575 SustainPine v3.0 168
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 9.0e-21
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
Internal
sp_v3.0_unigene81800 SustainPine v3.0 189
• AutoFact: 40S ribosomal protein S15a-4 [Arabidopsis thaliana] sp|Q9LX88.3|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 emb|CAB90931.1| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] gb|AAK76511.1| putative cytoplasmic ribosomal protein S15 2.0e-08
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Putative C-terminus
sp_v3.0_unigene98062 SustainPine v3.0 490
• AutoFact: Non-specific lipid-transfer protein n=4 Tax=Pinus RepID=NLTP_PINTA 7.0e-18
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus taeda (Loblolly pine). 0.0
C-terminus
sp_v3.0_unigene98522 SustainPine v3.0 335
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.669e-19
Internal
sp_v3.0_unigene99122 SustainPine v3.0 256
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.116e-10
Internal
sp_v3.0_unigene99309 SustainPine v3.0 214
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9STP1_RICCO 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.938e-13
Internal
sp_v3.0_unigene103345 SustainPine v3.0 433
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.831e-10
Internal
sp_v3.0_unigene104275 SustainPine v3.0 690
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.481e-11
Internal
sp_v3.0_unigene110273 SustainPine v3.0 317
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 1.539e-14
Internal
sp_v3.0_unigene110811 SustainPine v3.0 266
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.295e-38
Internal
sp_v3.0_unigene121612 SustainPine v3.0 1151
• AutoFact: Patellin-6, putative n=1 Tax=Ricinus communis RepID=B9SL24_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Patellin-5 4.094e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain