Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lipid binding

Term: GO:0008289  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63573 SustainPine v3.0 311
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.236e-14
N-terminus
sp_v3.0_unigene65057 SustainPine v3.0 221
• AutoFact: Non-specific lipid-transfer protein n=4 Tax=Pinus RepID=NLTP_PINTA 2.0e-19
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus resinosa (Red pine) (Norway pine). 0.0
N-terminus
sp_v3.0_unigene65488 SustainPine v3.0 404
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 1.0e-33
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
C-terminus
sp_v3.0_unigene65552 SustainPine v3.0 113
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
Putative C-terminus
sp_v3.0_unigene65603 SustainPine v3.0 310
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 4.0e-23
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
C-terminus
sp_v3.0_unigene66451 SustainPine v3.0 388
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.328e-08
Internal
sp_v3.0_unigene69453 SustainPine v3.0 360
• AutoFact: Non-specific lipid-transfer protein n=4 Tax=Picea sitchensis RepID=A9NJW4_PICSI 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene70292 SustainPine v3.0 450
• AutoFact: PPR domain containing protein 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.1e-11
N-terminus
sp_v3.0_unigene70917 SustainPine v3.0 392
• AutoFact: dynamin like Pr6(ADL6) [Triticum aestivum] 2.0e-09
• FL-Next: sp=Dynamin-2B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Dynamin-2A 1.34e-08
Internal
sp_v3.0_unigene71921 SustainPine v3.0 286
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gb|AEE28239.1| pentatricopeptide repea 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.984e-11
Internal
sp_v3.0_unigene74612 SustainPine v3.0 298
• AutoFact: Selenium-binding protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q8LI18_ORYSJ 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.3e-33
Putative N-terminus
sp_v3.0_unigene74653 SustainPine v3.0 251
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 6.0e-16
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
Misassembled
sp_v3.0_unigene75200 SustainPine v3.0 326
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.292e-10
Internal
sp_v3.0_unigene75655 SustainPine v3.0 377
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 5.0e-34
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene75939 SustainPine v3.0 352
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.56e-15
Internal
sp_v3.0_unigene78246 SustainPine v3.0 242
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
C-terminus
sp_v3.0_unigene78579 SustainPine v3.0 160
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78689 SustainPine v3.0 245
• AutoFact: CRAL_TRIO domain containing protein 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Patellin-5 1.006e-16
Internal
sp_v3.0_unigene78932 SustainPine v3.0 416
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.668e-11
Putative N-terminus
sp_v3.0_unigene79125 SustainPine v3.0 343
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Picea sitchensis RepID=B8LRP3_PICSI 2.0e-16
• FL-Next: sp=Non-specific lipid-transfer protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain