Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr15 scaffold_40, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1667 SustainPine v3.0 1675
AutoFact: putative anthocyanidine rhamnosyl-transferase [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 5.602e-06
Complete
sp_v3.0_unigene3597 SustainPine v3.0 4871
AutoFact: PREDICTED: similar to 2-oxo acid dehydrogenase, lipoyl-binding site n=1 Tax=Vitis vinifera RepID=UPI0001984EDC 0.0
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 3.688e-06
C-terminus
sp_v3.0_unigene4137 SustainPine v3.0 1463
AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene7800 SustainPine v3.0 1175
AutoFact: rhamnosyl transferase [Nierembergia sp. NB17] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 2.939e-07
C-terminus
sp_v3.0_unigene9943 SustainPine v3.0 2165
AutoFact: CAAX prenyl protease 1-like protein [Arabidopsis thaliana] sp|Q8RX88.1|FACE1_ARATH RecName: Full=CAAX prenyl protease 1 homolog; AltName: Full=Farnesylated proteins-converting enzyme 1; Short=AtFACE-1; Short=FACE-1; AltName: Full=Prenyl protein-specific e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene13179 SustainPine v3.0 1747
AutoFact: putative anthocyanidine rhamnosyl-transferase [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 2.136e-08
Complete
sp_v3.0_unigene13493 SustainPine v3.0 1664
AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] ref|NP_001031992.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana] gb|AAO42302.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene15192 SustainPine v3.0 3355
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene18838 SustainPine v3.0 571
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 1.621e-06
C-terminus
sp_v3.0_unigene22107 SustainPine v3.0 372
AutoFact: putative anthocyanidine rhamnosyl-transferase [Capsicum annuum] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 1.543e-11
Putative C-terminus
sp_v3.0_unigene110929 SustainPine v3.0 229
AutoFact: PREDICTED: similar to 2-oxo acid dehydrogenase, lipoyl-binding site n=1 Tax=Vitis vinifera RepID=UPI0001984EDC 0.0001
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 9.594e-08
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain