Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: spermidine biosynthetic process

Term: GO:0008295  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63459 SustainPine v3.0 186
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 6.0e-12
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene70751 SustainPine v3.0 421
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=5 Tax=Pooideae RepID=D4P703_LEYCH 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Hordeum chilense (Barley) (Critesion chilense). 0.0
• Sma3: S-adenosylmethionine decarboxylase proenzyme 3.43e-17
C-terminus
sp_v3.0_unigene71666 SustainPine v3.0 290
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-15
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 3.855e-21
Internal
sp_v3.0_unigene72362 SustainPine v3.0 296
• AutoFact: Spermidine synthase 3 n=4 Tax=Poaceae RepID=B3GPG7_ORYSJ 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spermidine synthase 1.746e-29
Internal
sp_v3.0_unigene73494 SustainPine v3.0 126
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 4.0e-09
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 7.544e-37
Internal
sp_v3.0_unigene73610 SustainPine v3.0 423
• AutoFact: Spermidine synthase n=1 Tax=Marsilea vestita RepID=E0AD24_MARVE 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spermidine synthase 4.82199e-40
Putative N-terminus
sp_v3.0_unigene73709 SustainPine v3.0 134
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 5.0e-08
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Daucus carota (Carrot). 0.0
Internal
sp_v3.0_unigene76061 SustainPine v3.0 364
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 4.00001e-40
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Internal
sp_v3.0_unigene76544 SustainPine v3.0 173
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 2.0e-15
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 8.218e-12
Internal
sp_v3.0_unigene78108 SustainPine v3.0 303
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-23
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene78670 SustainPine v3.0 139
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 2.0e-07
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase proenzyme 4.732e-13
Internal
sp_v3.0_unigene80511 SustainPine v3.0 130
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-06
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene80916 SustainPine v3.0 166
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 4.0e-10
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene81601 SustainPine v3.0 170
• AutoFact: Unassigned protein
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
Misassembled
sp_v3.0_unigene93636 SustainPine v3.0 1782
• AutoFact: Spermidine synthase 1 n=2 Tax=Solanoideae RepID=SPD1_DATST 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spermidine synthase 0.0
Putative Complete
sp_v3.0_unigene97685 SustainPine v3.0 345
• AutoFact: Spermidine synthase n=1 Tax=Petunia x hybrida RepID=Q852Q9_PETHY 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spermidine synthase 0.0
Internal
sp_v3.0_unigene100731 SustainPine v3.0 396
• AutoFact: Spermidine synthase 1 n=1 Tax=Pisum sativum RepID=SPD1_PEA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spermidine synthase 1.271e-39
Putative N-terminus
sp_v3.0_unigene113169 SustainPine v3.0 149
• AutoFact: Arginine decarboxylase n=1 Tax=Picea sitchensis RepID=B8LKQ6_PICSI 1.0e-07
• FL-Next: sp=Arginine decarboxylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arginine decarboxylase 1.317e-06
Internal
sp_v3.0_unigene126556 SustainPine v3.0 883
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T961_PHYPA 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
C-terminus
sp_v3.0_unigene127009 SustainPine v3.0 1170
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain