Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein-chromophore linkage

Term: GO:0018298  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene56905 SustainPine v3.0 415
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 6.372e-29
Internal
sp_v3.0_unigene56980 SustainPine v3.0 432
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.13e-16
N-terminus
sp_v3.0_unigene57052 SustainPine v3.0 279
• AutoFact: Phytochrome P (Fragment) n=3 Tax=Strobus RepID=B8XQ15_PINPE 1.0e-23
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Sma3: Phytochrome D 6.791e-35
Internal
sp_v3.0_unigene57060 SustainPine v3.0 411
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.356e-18
Putative Complete
sp_v3.0_unigene57073 SustainPine v3.0 296
• AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.457e-23
Putative C-terminus
sp_v3.0_unigene57946 SustainPine v3.0 128
• AutoFact: Photosystem I P700 chlorophyll a apoprotein A1 n=56 Tax=Chlorophyta RepID=PSAA_CHLRE 2.0e-15
• FL-Next: sp=Photosystem I P700 chlorophyll a apoprotein A1; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
• Sma3: PSI-A 2.75495e-42
Internal
sp_v3.0_unigene58781 SustainPine v3.0 256
• AutoFact: putative chlorophyll a/b binding protein [Triticum turgidum subsp. durum] 9.0e-35
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.837e-21
Internal
sp_v3.0_unigene58841 SustainPine v3.0 228
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 4.713e-26
Internal
sp_v3.0_unigene59212 SustainPine v3.0 375
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII 2.379e-18
Internal
sp_v3.0_unigene59602 SustainPine v3.0 388
• AutoFact: photolyase/blue-light receptor PHR2 [Arabidopsis thaliana] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA photolyase protein 6.179e-14
Internal
sp_v3.0_unigene60951 SustainPine v3.0 221
• AutoFact: Photosystem II 44 kDa reaction center protein n=11 Tax=Chroococcales RepID=PSBC_SYNY3 5.0e-21
• FL-Next: sp=Photosystem II CP43 chlorophyll apoprotein; Pinus armandii (Chinese white pine). Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP43 chlorophyll apoprotein 9.728e-08
Internal
sp_v3.0_unigene61015 SustainPine v3.0 282
• AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 3.0e-28
• FL-Next: tr=Type 1 chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Light-harvesting complex I protein Lhca1 8.529e-09
C-terminus
sp_v3.0_unigene61826 SustainPine v3.0 208
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 9.0e-31
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 8.40779e-44
Internal
sp_v3.0_unigene62284 SustainPine v3.0 353
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AEC10472.1| protein kinase domain-containing protein [Arabidopsis thaliana] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 5.072e-33
Internal
sp_v3.0_unigene63443 SustainPine v3.0 96
• AutoFact: Photosystem I P700 chlorophyll a apoprotein (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9TNL4_9BRYO 3.0e-10
• FL-Next: tr=ORF40p; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Sma3: P700 chlorophyll a-apoprotein A2 0.0
Putative Complete
sp_v3.0_unigene63890 SustainPine v3.0 212
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 8.0e-22
• FL-Next: tr=Chlorophyll a/b-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: LHCP 3.801e-25
Internal
sp_v3.0_unigene63945 SustainPine v3.0 256
• AutoFact: Unassigned protein
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCB5 5.891e-09
Internal
sp_v3.0_unigene64265 SustainPine v3.0 132
• AutoFact: ORF64c n=1 Tax=Pinus koraiensis RepID=Q85WW9_PINKO 6.0e-17
• FL-Next: tr=ORF64c; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Sma3: Photosystem I P700 chlorophyll a apoprotein A2 0.0
C-terminus
sp_v3.0_unigene65040 SustainPine v3.0 236
• AutoFact: pfam00875, DNA_photolyase, DNA photolyase 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.896e-12
Internal
sp_v3.0_unigene65216 SustainPine v3.0 165
• AutoFact: Phototropin n=1 Tax=Phaseolus vulgaris RepID=Q5DW42_PHAVU 3.0e-10
• FL-Next: Isoform 2 of Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 0.0
• Sma3: Phototropin 1.044e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain