Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mitochondrial matrix

Term: GO:0005759  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154198 SustainPine v3.0 367
• AutoFact: Acyl carrier protein n=2 Tax=Paracoccidioides brasiliensis RepID=C1GMD1_PARBD 2.0e-17
• FL-Next: sp=Acyl carrier protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl carrier protein 0.0
N-terminus
sp_v3.0_unigene154375 SustainPine v3.0 458
• AutoFact: Aspartate aminotransferase n=1 Tax=Glomerella graminicola M1.001 RepID=E3QIP2_COLGM 1.0e-33
• FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aspartate aminotransferase 9.914e-35
C-terminus
sp_v3.0_unigene154416 SustainPine v3.0 387
• AutoFact: Mitochondriatargeted chaperonin putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WHV2_9STRA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HSP60-2 1.251e-08
C-terminus
sp_v3.0_unigene154479 SustainPine v3.0 451
• AutoFact: Probable mitochondrial-processing peptidase subunit beta n=5 Tax=Arabidopsis RepID=MPPB_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154513 SustainPine v3.0 375
• AutoFact: Chaperonin 60 n=1 Tax=Polysphondylium pallidum RepID=D3B3I9_POLPA 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin-60kD, ch60, putative 1.395e-11
C-terminus
sp_v3.0_unigene154634 SustainPine v3.0 490
• AutoFact: putative cytosolic aldehyde dehydrogenase [Oryza sativa Japonica Group] gb|EAZ37515.1| hypothetical protein OsJ_21849 [Oryza sativa Japonica Group] 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 6.451e-35
N-terminus
sp_v3.0_unigene154770 SustainPine v3.0 341
• AutoFact: Cytochrome c n=1 Tax=Polysphondylium pallidum RepID=D3B0E6_POLPA 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
C-terminus
sp_v3.0_unigene154834 SustainPine v3.0 431
• AutoFact: Pyruvate dehydrogenase E1 beta subunit n=1 Tax=Dictyostelium purpureum RepID=F1A4Z4_DICPU 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyruvate dehydrogenase E1 component subunit beta, mitochondrial 2.373e-08
C-terminus
sp_v3.0_unigene154954 SustainPine v3.0 330
• AutoFact: Heat shock protein 60 (Fragment) n=1 Tax=Nyctotherus ovalis RepID=Q3LDT0_NYCOV 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin CPN60, mitochondrial 3.006e-11
Internal
sp_v3.0_unigene155003 SustainPine v3.0 240
• AutoFact: Methylcrotonoyl-CoA carboxylase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC32_GEOOG 1.0e-25
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene155054 SustainPine v3.0 498
• AutoFact: Succinate-semialdehyde dehydrogenase, NADP+ n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KJX5_PSEPF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Succinic semialdehyde dehydrogenase 2.745e-09
Putative N-terminus
sp_v3.0_unigene155110 SustainPine v3.0 279
• AutoFact: PREDICTED: cytochrome c, somatic-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE0B64 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 4.901e-12
N-terminus
sp_v3.0_unigene155137 SustainPine v3.0 554
• AutoFact: Redoxin domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HQX3_PARL1 7.0e-37
• FL-Next: tr=Peroxiredoxin type II; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Peroxiredoxin 2.935e-07
Complete
sp_v3.0_unigene155160 SustainPine v3.0 442
• AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQY3_9RICK 0.0
• FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydrolipoyl dehydrogenase 0.0
Putative C-terminus
sp_v3.0_unigene155234 SustainPine v3.0 164
• AutoFact: Dihydrolipoyl dehydrogenase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8LBI2_THAPS 1.0e-13
• FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydrolipoyl dehydrogenase 1.26117e-44
Putative C-terminus
sp_v3.0_unigene155236 SustainPine v3.0 282
• AutoFact: Electron transfer flavoprotein, beta subunit n=2 Tax=unclassified Gammaproteobacteria RepID=A4A4H6_9GAMM 2.0e-29
• FL-Next: sp=Electron transfer flavoprotein subunit beta, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Electron transfer flavoprotein beta-subunit, putative 3.06e-09
Internal
sp_v3.0_unigene155333 SustainPine v3.0 425
• AutoFact: Cytochrome c n=1 Tax=Dictyostelium fasciculatum RepID=F4PHG4_9MYCE 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Complete
sp_v3.0_unigene155408 SustainPine v3.0 458
• AutoFact: Dihydrolipoyllysine-residue acetyltransferase (Dihydrolipoamide S-acetyltransferase) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAZ4_9SPHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PDCE2 9.004e-08
Internal
sp_v3.0_unigene155419 SustainPine v3.0 266
• AutoFact: PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha 1 n=1 Tax=Ciona intestinalis RepID=UPI00006A63C6 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PDHE1-A 3.277e-12
Internal
sp_v3.0_unigene155776 SustainPine v3.0 376
• AutoFact: Trypsin family n=1 Tax=Volvox carteri f. nagariensis RepID=D8TZQ9_VOLCA 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain