Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mitochondrial matrix

Term: GO:0005759  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene141252 SustainPine v3.0 602
• AutoFact: Glutamate dehydrogenase n=4 Tax=Pinaceae RepID=D9IXC9_PINPS 0.0
• FL-Next: sp=Glutamate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Glutamate dehydrogenase 2.883e-24
Putative C-terminus
sp_v3.0_unigene142011 SustainPine v3.0 184
• AutoFact: RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor emb|CAA81558.1| E1 alpha subunit of pyruvate dehydrogenase precursor [Solanum tuberosum] 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PDHE1-A 8.409e-17
Internal
sp_v3.0_unigene142034 SustainPine v3.0 483
• AutoFact: Malic enzyme n=3 Tax=Malpighiales RepID=B9GPX3_POPTR 3.0e-21
• FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malic enzyme 2.531e-26
Putative C-terminus
sp_v3.0_unigene142333 SustainPine v3.0 1592
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine endopeptidase degp2, putative 8.939e-20
Putative Complete
sp_v3.0_unigene142387 SustainPine v3.0 1244
• AutoFact: Aspartate aminotransferase n=8 Tax=Pinaceae RepID=C0PSV4_PICSI 0.0
• FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aspartate aminotransferase 0.0
N-terminus
sp_v3.0_unigene142936 SustainPine v3.0 293
• AutoFact: mitochondrial processing peptidase [Avicennia marina] 2.0e-21
• FL-Next: sp=Probable mitochondrial-processing peptidase subunit beta; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Mitochondrial processing peptidase 2.791e-12
Misassembled
sp_v3.0_unigene143035 SustainPine v3.0 350
• AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 9.0e-26
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin reductase 0.0
C-terminus
sp_v3.0_unigene143081 SustainPine v3.0 519
• AutoFact: Aldehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RKT6_RICCO 8.99634e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase, putative 2.759e-09
Putative C-terminus
sp_v3.0_unigene143160 SustainPine v3.0 1152
• AutoFact: Aldehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RKT3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 6.957e-37
Putative Complete
sp_v3.0_unigene143163 SustainPine v3.0 703
• AutoFact: aldehyde dehydrogenase [Vitis pseudoreticulata] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 1.455e-28
C-terminus
sp_v3.0_unigene144189 SustainPine v3.0 567
• AutoFact: Aldehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RKT3_RICCO 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 6.407e-31
C-terminus
sp_v3.0_unigene144419 SustainPine v3.0 450
• AutoFact: mitochondrial aldehyde dehydrogenase ALDH2 [Hordeum vulgare subsp. vulgare] dbj|BAJ90704.1| predicted protein [Hordeum vulgare subsp. vulgare] dbj|BAJ86905.1| predicted protein [Hordeum vulgare subsp. vulgare] 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 5.781e-28
C-terminus
sp_v3.0_unigene144524 SustainPine v3.0 669
• AutoFact: Coniferaldehyde/sinapaldehyde dehydrogenase n=2 Tax=Brassica napus RepID=E1VD27_BRANA 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 2.24e-34
C-terminus
sp_v3.0_unigene144623 SustainPine v3.0 343
• AutoFact: aldehyde dehydrogenase [Vitis pseudoreticulata] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 9.209e-27
C-terminus
sp_v3.0_unigene144978 SustainPine v3.0 1461
• AutoFact: Aldehyde dehydrogenase (Acceptor) n=4 Tax=Nitrosococcus RepID=Q3J7Y8_NITOC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 2.714e-37
Putative Complete
sp_v3.0_unigene145194 SustainPine v3.0 510
• AutoFact: Putative cytosolic aldehyde dehydrogenase n=2 Tax=Oryza sativa RepID=Q69XE0_ORYSJ 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 8.604e-35
N-terminus
sp_v3.0_unigene145253 SustainPine v3.0 316
• AutoFact: Aldehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RKT3_RICCO 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 1.094e-22
C-terminus
sp_v3.0_unigene145359 SustainPine v3.0 619
• AutoFact: Putative cytosolic aldehyde dehydrogenase n=2 Tax=Oryza sativa RepID=Q69XE0_ORYSJ 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 1.306e-25
Putative N-terminus
sp_v3.0_unigene146251 SustainPine v3.0 293
• AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 5.0e-32
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene146910 SustainPine v3.0 592
• AutoFact: Ketol-acid reductoisomerase, chloroplastic n=2 Tax=core eudicotyledons RepID=ILV5_SPIOL 1.0e-26
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain