Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: one-carbon metabolic process

Term: GO:0006730  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146291 SustainPine v3.0 613
• AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 4.0e-28
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 8.947e-39
C-terminus
sp_v3.0_unigene146330 SustainPine v3.0 499
• AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 1.19e-35
Internal
sp_v3.0_unigene146442 SustainPine v3.0 494
• AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 1.99965e-42
• FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 4.258e-31
Misassembled
sp_v3.0_unigene146495 SustainPine v3.0 722
• AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 5.623e-40
C-terminus
sp_v3.0_unigene146649 SustainPine v3.0 573
• AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 2.125e-30
Internal
sp_v3.0_unigene146679 SustainPine v3.0 666
• AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 6.85235e-43
Putative C-terminus
sp_v3.0_unigene146722 SustainPine v3.0 789
• AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
• FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: S-adenosylmethionine synthetase 4.872e-30
N-terminus
sp_v3.0_unigene146746 SustainPine v3.0 820
• AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
• FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: Methionine S-adenosyl transferase 4.512e-36
Internal
sp_v3.0_unigene146756 SustainPine v3.0 267
• AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 1.00053e-42
• FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Methionine S-adenosyl transferase 1.736e-35
Internal
sp_v3.0_unigene146876 SustainPine v3.0 942
• AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 1.386e-35
C-terminus
sp_v3.0_unigene146901 SustainPine v3.0 670
• AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
• FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 7.119e-36
Internal
sp_v3.0_unigene146916 SustainPine v3.0 441
• AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 1.285e-35
Internal
sp_v3.0_unigene146970 SustainPine v3.0 657
• AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
• FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: Methionine S-adenosyl transferase 7.875e-36
Internal
sp_v3.0_unigene147036 SustainPine v3.0 1192
• AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 1.19e-35
C-terminus
sp_v3.0_unigene150259 SustainPine v3.0 180
• AutoFact: Adenosylhomocysteinase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQI3_DESBD 2.0e-10
• FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenosylhomocysteinase 2.67e-31
C-terminus
sp_v3.0_unigene150830 SustainPine v3.0 527
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ31_PHYPA 1.99993e-41
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene151572 SustainPine v3.0 142
• AutoFact: Adenosylhomocysteinase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RR00_BOTFB 3.0e-09
• FL-Next: sp=Adenosylhomocysteinase; Pinus pinaster (Maritime pine). 0.0
Internal
sp_v3.0_unigene151578 SustainPine v3.0 445
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=GLYA_CELJU 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene151775 SustainPine v3.0 498
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y594_PHATC 2.99878e-43
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene151815 SustainPine v3.0 422
• AutoFact: S-adenosylmethionine synthetase n=1 Tax=Dictyostelium purpureum RepID=F1A2P5_DICPU 1.99965e-42
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 6.135e-39
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain